Gene YpsIP31758_3381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3381 
SymbollpxC 
ID5385500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp3800774 
End bp3801694 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content46% 
IMG OID640866396 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionYP_001402338 
Protein GI153950483 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value6.92402e-16 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAAC AAAGGACTTT AAAACGTATT GTTCAGGCGA CGGGTGTCGG TTTGCACACC 
GGTAAAAAAG TCACGCTGAC AATGCGACCC GCGCCGGCTA ATACCGGGGT CATCTATCGT 
CGCACTGACT TGAATCCACC GGTTGATTTT CCGGCAGATG CAAAATCCGT GCGTGATACC 
ATGCTCTGTA CTTGCCTGGT CAATGAGCAT GACGTGCGTA TTTCTACTGT TGAACATCTC 
AACGCTGCTT TGGCAGGGTT AGGGATTGAT AACATTATTA TTGAAGTTAA CGCCCCCGAA 
GTACCAATCA TGGATGGCAG CGCCAGTCCA TTCGTGTACT TGTTGCTGGA TGCCGGTATT 
GAAGAGTTAA ACTCAGCGAA GAAATTCCTG CGTTTGAAAG AGACAGTACG GGTTGAAGAT 
GGTGATAAAT GGGCTGAATT GTCTCCATTC AATGGATTCC GTTTGGACTT TACCATTGAT 
TTTAATCACC CGGCGATTGA CTCAAGTACA CAGCGTTATT GCTTAGATTT CTCGGCCGAT 
TCTTTCGTCC GCCAAATCAG CCGTGCGCGT ACTTTTGGTT TCATGCGTGA TATCGAATAT 
CTGCAGTCCC GCGGTTTGTG CCTGGGCGGT AGTTTCGATT GTGCCATCGT GGTAGATGAT 
TACCGCGTAT TAAATGAAGA TGGCCTACGC TTTGAAGATG AGTTTGTTCG TCACAAAATG 
TTGGACGCTA TTGGCGACCT GTTTATGTGC GGCCATAATA TTATTGGCGC ATTTACGGCG 
TACAAATCTG GTCATGCCTT AAATAACAAG CTGTTGCAGG CTGTTTTAGC GAAGCAAGAA 
GCTTGGGAAT TTGTGACGTT CCAAGATGAA GCTGAAATGC CTTTGGCATT CAAAGCACCG 
TCTACAGTAT TAGCTTACTA A
 
Protein sequence
MIKQRTLKRI VQATGVGLHT GKKVTLTMRP APANTGVIYR RTDLNPPVDF PADAKSVRDT 
MLCTCLVNEH DVRISTVEHL NAALAGLGID NIIIEVNAPE VPIMDGSASP FVYLLLDAGI 
EELNSAKKFL RLKETVRVED GDKWAELSPF NGFRLDFTID FNHPAIDSST QRYCLDFSAD 
SFVRQISRAR TFGFMRDIEY LQSRGLCLGG SFDCAIVVDD YRVLNEDGLR FEDEFVRHKM 
LDAIGDLFMC GHNIIGAFTA YKSGHALNNK LLQAVLAKQE AWEFVTFQDE AEMPLAFKAP 
STVLAY