Gene YpsIP31758_3380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3380 
Symbol 
ID5387173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3800068 
End bp3800592 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content49% 
IMG OID640866395 
Producthypothetical protein 
Protein accessionYP_001402337 
Protein GI153949978 
COG category[S] Function unknown 
COG ID[COG4701] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000000736191 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAAA ACCGCCCACA ATTATTAGAT GTTCTGTTCG ATGATGCGGT TGCAGCAGAA 
AACGGACCGC TACATAACGT ACAACAACGC GCGACTGCAC TGTTAAAACT TAACCGTGCG
GTAAAAGGAT TACTCCCTTC ACAATTACAG CCGTGGTGCC GTGTCGCAAA CTATCGACAG
AGTGTTTTAG TGCTAGAGAC AGCGAATGCC AGTTGGTTGA TGCGCTTACG TTACGAACAA
CCTGCGTTGC TATCCGCACT ACGAGCGCAA ATTCTACCAT CATTGTCTTC AATCGACATC
AGGATTAATC CATCGTTAAT GGCGAAAGGC CATAACGTGA CACAAGATGC CGCAAAATCG
CCGCAAGATC GTGTAAAATC ACCGCCAGTA CGCCACTTAA GCTTGGAAAG TGCTAAGGAA
CTAAGAGGAT TAGCGAGCCG TAGCCCTGAA AAACTGAGAG TGATCTTGGA ACGACTGGCT
GCGTTGGCCG GAGAGGGTGC CAACGCAACC AAGCGTGATA AGTAG
 
Protein sequence
MRENRPQLLD VLFDDAVAAE NGPLHNVQQR ATALLKLNRA VKGLLPSQLQ PWCRVANYRQ 
SVLVLETANA SWLMRLRYEQ PALLSALRAQ ILPSLSSIDI RINPSLMAKG HNVTQDAAKS
PQDRVKSPPV RHLSLESAKE LRGLASRSPE KLRVILERLA ALAGEGANAT KRDK