| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3335 |
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| Symbol | hrpB |
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| ID | 5386268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3751289 |
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| End bp | 3753793 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640866350 |
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| Product | ATP-dependent RNA helicase HrpB |
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| Protein accession | YP_001402292 |
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| Protein GI | 153949626 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.825067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGACGA ATGTTGTGGT GAGTGAGAGA AAAAATGATG TTGCGATAGC GGCGTTACCG
GTGAGTGAAG TGCTCGGCGA GTTGCTCTCT GCATTGCAAT CCTCATCGCA AGTCCTGCTT
CATGCCCCAA CCGGTGCCGG TAAATCTACC TGGCTGCCGC TACAAATCTT GCAACAAAGT
CAGTTTCTTA ATAGCGGGTC ACCGGGCCGC ATCATTATGC TGGAGCCACG GCGACTGGCG
GCAAAAAATG TGGCTTACCG TTTGGCGCAA CAATTGGGTG AATTGCCCGG CCAGACAGTA
GGTTACCGGA TGCGCGCAGA AAGCAAGATC GGGCCGGATA CGCGTCTGGA AGTGGTGACC
GAAGGTATTT TGACTCGGAT GCTACAACAG GATGCCGAGC TTCAGGGCGT GTCATTGGTG
ATCCTTGATG AATTCCACGA ACGCAGTCTG CAAGCAGATT TGGCGCTAGC GTTATTGCTG
GATGTGCAAC AGGGGCTGCG CGATGATCTG AAACTATTAA TCATGTCAGC CACGCTGGAT
AACCAGCGCC TTTCTGCTTT GTTACCCTCC GCTCCGGCCA TTGTCTCGGC TGGGCGCAGT
TTCCCGGTTG AACGCAGTTA TCAGCCGCTC TCCAGCCATG AACGGTTGGA AGAGGGGGTT
GCCAGCCGCG TTAAACGCTT GCTAAATGAA CAGCCCGGTT CCTTGTTGCT GTTTTTACCG
GGTGTCAGTG AAATCCATCG AGTGATGGAA CGGCTGCATG GCGAGGTCGC CAGCGATACC
GATTTGTGCC CGCTGTACGG TGCTTTGCCA CTCAGTGAAC AGCAAAAAGC GATTCAACCG
GCCGCTATCG GGCGACGTAA AGTGGTACTG GCAACCAATA TTGCCGAAAC CAGTTTGACC
ATTGAGGGCA TCCGGTTGGT GGTTGATAGC GGGCTGGAAC GGGTTGCGCG TTTTGATATC
AAAAACGGTC TGACTCGCTT GGTCACTCAG CGTATCAGTC AGGCGTCAAT GGTCCAGCGC
GCAGGCCGTG CCGGGCGGCT AGAACCGGGT ATCTGTTGGC ATCTGTTTGC CAAAGAGCAG
GCCGAACGGG CGGCGGAATA CAGTGAACCG GAAATACTGA ACAGCGATTT ATGCGGTCTG
TGGTTGGAAT TACTGAGTTG GGGATGTCAG GATGCGGCGC AACTCTGTTG GCTCGATCAC
CCCCCGGCAG CGGCACTGGC TGTGGCCCAT GATTTATTAG GGCGATTGGA TGCCATTGAT
GACCAAGGGC AGTTGACGGC CACGGGGCGC ACTATGGCAA CGCTGGGCTG CGAGCCTCGA
TTGGCGGCCA TGTTGTGCTT TGGGGCGGGG CATAGCCCCG ATGCACTGGC TACGGCTGCG
TTGCTAGCGG CTATTTTGGA AGAACCCCCT CGCTCTGGCC AAATAGATTT ACATGACTGG
CTCAGCCGGC CGCAGCCTCA CTGGCAACGG CGCGCCAGAC AACTGACACA AAGGCTTAAC
GCGCGCGGAG GCAGTGTAGA CCATGCGCTG GCCGCACAAT TGTTGGCGCT GGCTTATCCG
GATAGGATCG CACAGCAGCG GGGGCAGGAT GGGCGCTACC TGCTGGCTAA CGGCATGGGG
GCTGCCATGG CGCAGGATGA GGCGCTATCG CGATCCCCCT GGCTAGTGGC GGTTGGGCTA
CTGCAAAACC ACAGCGGGCC GGATGCACGT ATTTTGCTGG CCTTGCCCGT TGACATCGAA
CAGTTGGTGA CGTGTCTGCC GCGGCAAGTG GAAGAGCGCA CGGTGGTGGA GTGGGATGAT
GAAAAAGGTA CGCTGCGAGC CTGGCGGCGC TGGCAAATTG GGCGTTTGAT CCTGCGGGCG
CAGCCATTGG CTAAACCGGA TGACGCGGCA TTGCAGCAGG CCTTGCTAAA CTGGGTTCGG
GAGCAAGGAT TACAGATACT TAACTGGGAT GAACCTGCCG AGCAGCTACG TACCCGCTTA
CAATGTGCTG CCCGTTGGTT GCCAGAGGCG CCATGGCCTG CGGTCGATGA CGACAGTTTG
CAGGATAAAC TGGCGCTCTG GTTGCAGCCG TCATTATCCG GTGTTCGTGA TCTACGTGGG
CTTCGGCAGG TGAATATTGC TGAAGCCTTA ACCCGCTTGT TAGATTGGAA ACAACGCCAA
CGGCTGGATA CCGAACTGCC AACTCATTAC ACTGTGCCCA CTGGCAGTCG CCTGCCAATA
CGTTATTATG TCGACCGGCC GCCGGTGTTG GCGGTACGTT TGCAGGAGGT TTTTGGTGAA
CAGCAAAGCC CTATGCTGGC GAGCGGGCGG GTTGCGGTGG TGCTTGAACT GCTTTCTCCC
GCCCATCGGC CATTACAGAT TACCGGCGAT TTAGCGGCAT TCTGGCAGGG GGCGTATCGT
GAGGTGCAAA AAGAGATGAA AGGGCGTTAC CCCAAACATG TCTGGCCTGA TGACCCGGCA
CATACCCGGC CAACCCGCAG AACCAAAAAA TATCAAGATA AGTGA
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| Protein sequence | METNVVVSER KNDVAIAALP VSEVLGELLS ALQSSSQVLL HAPTGAGKST WLPLQILQQS
QFLNSGSPGR IIMLEPRRLA AKNVAYRLAQ QLGELPGQTV GYRMRAESKI GPDTRLEVVT
EGILTRMLQQ DAELQGVSLV ILDEFHERSL QADLALALLL DVQQGLRDDL KLLIMSATLD
NQRLSALLPS APAIVSAGRS FPVERSYQPL SSHERLEEGV ASRVKRLLNE QPGSLLLFLP
GVSEIHRVME RLHGEVASDT DLCPLYGALP LSEQQKAIQP AAIGRRKVVL ATNIAETSLT
IEGIRLVVDS GLERVARFDI KNGLTRLVTQ RISQASMVQR AGRAGRLEPG ICWHLFAKEQ
AERAAEYSEP EILNSDLCGL WLELLSWGCQ DAAQLCWLDH PPAAALAVAH DLLGRLDAID
DQGQLTATGR TMATLGCEPR LAAMLCFGAG HSPDALATAA LLAAILEEPP RSGQIDLHDW
LSRPQPHWQR RARQLTQRLN ARGGSVDHAL AAQLLALAYP DRIAQQRGQD GRYLLANGMG
AAMAQDEALS RSPWLVAVGL LQNHSGPDAR ILLALPVDIE QLVTCLPRQV EERTVVEWDD
EKGTLRAWRR WQIGRLILRA QPLAKPDDAA LQQALLNWVR EQGLQILNWD EPAEQLRTRL
QCAARWLPEA PWPAVDDDSL QDKLALWLQP SLSGVRDLRG LRQVNIAEAL TRLLDWKQRQ
RLDTELPTHY TVPTGSRLPI RYYVDRPPVL AVRLQEVFGE QQSPMLASGR VAVVLELLSP
AHRPLQITGD LAAFWQGAYR EVQKEMKGRY PKHVWPDDPA HTRPTRRTKK YQDK
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