Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3334 |
Symbol | mrcB |
ID | 5384486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3748700 |
End bp | 3751180 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640866349 |
Product | penicillin-binding protein 1b |
Protein accession | YP_001402291 |
Protein GI | 153950760 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGGGG ACGATCGTGA GCCGATAGGG CGCAAGGGCA AGAAAGCCCA ACCCAAAGCA GCACCAAAAC GTCCACTGCG CCGTCGGCGT GATGAAGATG AATACGAAGA AGATTATGAC GAAGAACAAA ATGATGATGA TTATGATGAC GAGGAGGAAC CGATGCCAAG AAAAGTAGCA TCACGCCCAC CTCGCAAGAA ACGCCGTTGG ATCGGGTTGT TGATCAAACT ATTCCTGATT GGGGCCGTGG CTTTGGCGAT CTATGGGGTT TACCTCGATT CGCAAATCCG CAGCCGTATT GATGGCAAAG TCTGGCAATT ACCGGCTGCC GTGTATGGCC GGATGGTCAA TCTTGAGCCG GGTATGTCCT ACAGCAAAAA AGAGATGGTC GCCTTGCTGG AAGGGATGCA ATACCGTCAG GTCAGCCGCA TGACCCGCCC TGGGGAGTTC ACGGTTCAGA ACGACAGTAT CGATATCTTG CGCCGGCCGT TCGATTTCCC TGATGGTAAA GAAGGCCAAA TTCGCGCCCG TTTACTGTTC AAAAATGATC GTCTGGCCCA GATTCAAAAC CTGGATAATC AGCGTGATTT CGGGCTATTC CGCCTCGATC CCAAGTTGAT TACCATGCTG CAATCACCTA ACGGTGAACA GCGTCTGTTT GTTCCGCGCG CCGGGTTCCC TGATTTGCTG GTGGACACCT TGCTGGCGAC TGAAGACCGC CATTTCTATG AGCATGATGG CGTCAGCCCG TATTCCATTG CTCGAGCCGT GGTCGCTAAC CTGACAGCTG GTAAAGCGGT GCAGGGGGGC AGTACGCTGA CGCAACAGTT AGTGAAAAAC CTGTTCCTGA CCAATGAACG TTCGCTGGTA CGTAAACTTA ACGAGGCCTA TATGGCCCTG TTGATGGATT ATCGCTACAG CAAAGATCGG ATCTTGGAAC TCTATCTGAA CGAAGTCTAT CTTGGTCAGA GTGGTGGTGA CCAAATCCGT GGCTTCCCGC TGGGTAGCTT GTATTACTTT GGCCGCCCGG TTGATGAATT GAGTCTCGAT CAGCAAGCCA TGTTGGTTGG CATGGTGAAA GGGGCCTCAC TGTATAACCC GTGGCGTAAT CCTAAGCTGG CACTTGAGCG GCGTAATTTG GTCCTGCGCT TGTTGCAGAA TCAAGGGATT ATCGATGCTG AGCTTTACAC CATGCTCAGT GCCCGTCCGC TGGGGGTGCA GCCGAAAGGC GGAGTCATCA CACCTCAACC TGCTTTTATG CAGATGGTGC GCCAGGAGCT GCAACAGAAG TTGGGTAACA AGGTCAATGA TCTGTCTGGC GTGAAGATCT TCACCACCTT GGATCCGGTT TCACAAGATG CCGCAGAAAA AGCCATCGAA GACGGTGTTC CGGCGCTGAG AGCCGCCCGT AATATGAATG ACCTGGAAGC GGCGATGGTG GTGGTTGACC GTTTCAGTGG CGAAGTGCGT GCCATGGTGG GCGGTTCACA GCCACAATTT GCCGGTTTTA ACCGTGCGAT GCAGGCCCGC CGTTTGGTGG GGTCACTTGC CAAACCACCA ACCTATCTGG CCGCGTTGAG TGAGCCAGAT AAGTACCGCC TCAATACCTG GCTTTCGGAC CAACCGCTGT CGCTTAAATT ATCGAACGGT TCATTGTGGC AGCCGAAAAA CTATGATCGC CAGTTCCGTG GTCAGGTCAT GTTGATGGAT GCGTTGGTGA ACTCACTGAA CATCCCAACA GTCAATTTGG GGATGTCAGT GGGCTTAGAT CAGATCAGCG CCACACTGCA ACGCCTTGGG ATCCCGAAAT CAGTCATTAA TCCGGTCCCA GCCATGTTAT TGGGGGCGAT TGACCTGACT CCGGTTGAAG TTGCGCAGGA GTATCAGACG ATCGCCAGTG GTGGCAACCG TGCACCGTTG TCGGCTGTGC GTTCGGTTAT TGCTGAGGAT GGGACCGTGC TGTATCAGAG CTTCCCACAG GCAGAACGTA TGGTGCCTGC ACAAGCCTCT TACCTGACGC TGTATGCGAT GCAGCAAGGG GTTGTCCGTG GTACATCACG CTCTCTCTCG GCGAAGTTCG GCAAATATAA TCTGGCGGCC AAAACCGGGA CAACCAACGA TCTGCGTGAC AGTTGGTTTG CCGGTATTGA TGGCAAAGAA GTGACCATTG CCTGGATTGG GCGCGACAAT AACGGCCCGA CTAAGCTGAC CGGGGCCAGC GGCGCGCTAA CCTTGTATCG CCGCTATCTG GAAAACCAAA CGCCGTTGCC GCTGATTCTG CAACCGCCAG AAGGCATTAG CCAAATGAAC ATTGATTCGG CGGGGAACTT CGTCTGTGGT GAAGGGAGCG GGATGCGCGT CATTCCTGTT TGGACCGAAA ATCCGCAAGC TTTGTGTCAG GGATCCGCAC CCACTCAAGA CCCCACAAAA CCTAACGATG ATGGTGTTGC CGATTGGATC AAAGAGATGT TTGGCCAATA A
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Protein sequence | MSGDDREPIG RKGKKAQPKA APKRPLRRRR DEDEYEEDYD EEQNDDDYDD EEEPMPRKVA SRPPRKKRRW IGLLIKLFLI GAVALAIYGV YLDSQIRSRI DGKVWQLPAA VYGRMVNLEP GMSYSKKEMV ALLEGMQYRQ VSRMTRPGEF TVQNDSIDIL RRPFDFPDGK EGQIRARLLF KNDRLAQIQN LDNQRDFGLF RLDPKLITML QSPNGEQRLF VPRAGFPDLL VDTLLATEDR HFYEHDGVSP YSIARAVVAN LTAGKAVQGG STLTQQLVKN LFLTNERSLV RKLNEAYMAL LMDYRYSKDR ILELYLNEVY LGQSGGDQIR GFPLGSLYYF GRPVDELSLD QQAMLVGMVK GASLYNPWRN PKLALERRNL VLRLLQNQGI IDAELYTMLS ARPLGVQPKG GVITPQPAFM QMVRQELQQK LGNKVNDLSG VKIFTTLDPV SQDAAEKAIE DGVPALRAAR NMNDLEAAMV VVDRFSGEVR AMVGGSQPQF AGFNRAMQAR RLVGSLAKPP TYLAALSEPD KYRLNTWLSD QPLSLKLSNG SLWQPKNYDR QFRGQVMLMD ALVNSLNIPT VNLGMSVGLD QISATLQRLG IPKSVINPVP AMLLGAIDLT PVEVAQEYQT IASGGNRAPL SAVRSVIAED GTVLYQSFPQ AERMVPAQAS YLTLYAMQQG VVRGTSRSLS AKFGKYNLAA KTGTTNDLRD SWFAGIDGKE VTIAWIGRDN NGPTKLTGAS GALTLYRRYL ENQTPLPLIL QPPEGISQMN IDSAGNFVCG EGSGMRVIPV WTENPQALCQ GSAPTQDPTK PNDDGVADWI KEMFGQ
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