Gene YpsIP31758_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3319 
SymbolrelA 
ID5386884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3729098 
End bp3731332 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content51% 
IMG OID640866334 
ProductGDP/GTP pyrophosphokinase 
Protein accessionYP_001402276 
Protein GI153949337 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.6158e-13 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCGG TACGAAGTGC GCATTTAAAC CCAGCGGGTG AGTTTGCTCT TGACGATTGG 
ATTGCCAGTT TAGGGCTTGC CAATCCGCAG TCATCTGAGC GATTAGCCGA AACCTGGCGT
TACTGTGAAC AACAGACGCA AAACCATCCC GATGCCTCGT TATTACTGTG GCGCGGTCTT
GAAATGGTTG AAATTCTTTC CACTCTGAGT ATGGATAACG ACAGTATGCG CGCGGCGCTG
CTGTTCCCGC TGGTAGACGC CAATATCGTG GACGAAACTA CCCTGACTGA GCAATTCGGT
AAGGGGATTA CGTATCTGGT ACACGGTGTG CGTGATATGG ATGCTATCCG CCAGTTAAAA
GCCACTCACA ACGATTCCAT GAGCTCGGAG CAAGTGGATA ACGTGCGCCG TATGTTATTG
GCGATGGTGG AGGATTTCCG CTGCGTGGTG ATCAAGCTGG CAGAGCGGAT CGCTCATCTG
CGTGAAGTCA AAGATGCACC GGAAGATGAA CGTGTTCTGG CGGCTAAAGA GTGTTCCAAT
ATTTACGCAC CACTGGCGAA CCGTTTGGGG ATTGGTCAGA TTAAATGGGA GTTGGAGGAT
TTCTGCTTCC GTTATCTGCA TCCAGATGAA TATAAGAAAA TCGCCAAATT ACTCCACGAG
AGGCGTATTG ATCGCGAACA ATTTATTGAT GACTTCGTTG CTTCATTACA TAAGGCGATG
GCCGACGAAG GCATTAAAGC CGACATTTAT GGCCGACCGA AGCATATCTA CAGCATTTGG
CGCAAAATGC AGAAAAAGTC GCTGGCCTTC GATGAGCTAT TCGACGTCCG CGCGGTGCGG
GTGGTGGTGG AACGCTTGCA GGATTGTTAT GCCGCGTTAG GGATTGTTCA CACGCACTTC
CGGCATTTAC CTGATGAATT TGATGATTAT GTGGCCAACC CTAAGCCAAA TGGTTACCAA
TCGATCCATA CTGTGGTGCT TGGGCCACGA GGTAAAACGT TAGAGATTCA GATTCGTACC
CGCCAGATGC ATGAAGATGC CGAGTTGGGG GTTGCTGCGC ACTGGAAATA TAAAGAAGGG
GCCGTGGCAG CGGGCCGTTC GAGTTATGAA GGGCGAATTG CCTGGTTACG TAAATTGATC
GCCTGGCAGG AAGAGATGGC TGATTCTGGC GAAATGCTGG ATGAAGTGCG CAGTCAGGTA
TTTGATGATC GGGTGTACGT GTTTACGCCG AAAGGCGATG TGATTGACCT GCCTGCCGGC
TCGACGCCGC TGGATTTTGC CTACCATATT CATAGCGATG TGGGCCACCG TTGTATCGGT
GCCAAAATCA GTGGCCGCAT TGTGCCGTTT ACTTATCAGT TGCAGATGGG TGATCAAATT
GAAATTATCA CTCAAAAACA GCCAAACCCA AGCCGTGACT GGCTGAATCC TAACCTCGGT
TACATCACGA CCAGTCGCGG ACGTTCCAAA ATTCATAATT GGTTCCGCAA ACAAGATAGA
GATAAGAATA TTCTGGCTGG CCGGCAAATG CTGGATGATG AGCTGGAGCA TCTGGATATC
AGTCTGAAAG AGGCTGAGAA GCTGCTTGTT CCGCGTTACA ACATGAATTC GATGGATGAA
GTGTTAGCGG CGATTGGGGG GGGTGATATC CGTCTGAATC AGATGGTGAA CTTCCTCCAG
GGCAAACTGA ATAAGCCAAC GGCAGAAGAG GCTGATCTAG AAGCACTCCG TCATCTGAAT
AACAAGCATC AGCCCGCGCC ACGTAACGCC AGCAAAGACA GTGGGCGTAT TGTGGTCGAA
GGTGTCGGTA ACCTGATGCA CCATATTGCC CGTTGTTGCC AGCCGATCCC CGGTGATCAA
ATTATCGGTT TTATCACGCA AGGGCGGGGG ATATCGATTC ACCGTGCAGA TTGTGAGCAG
TTGGCTGAAT TGGAATCCCA TGCACCGGAA CGGATTGTCG ATGCAGTCTG GGGCGAAAGC
TACTCCAGCG GTTATTCGCT GGTGGTGCGG GTTACGGCTA ATGACCGCAG TGGGTTATTG
CGCGATATCA CTACGATCCT GGCAAATGAG AAAGTTAACG TACTGGGCGT TGCCAGCCGC
AGCGATACCA AAAAGATGGT GGCGACTATC GATATGGATA TCGAGATCTA TAACTTGCAG
GTGCTGGGCC GGGTATTGGC CAAACTGAAT CAGTTGCCGG ATGTCATAGA CGCCCGTCGC
CTCCATGGCA ATTAG
 
Protein sequence
MVAVRSAHLN PAGEFALDDW IASLGLANPQ SSERLAETWR YCEQQTQNHP DASLLLWRGL 
EMVEILSTLS MDNDSMRAAL LFPLVDANIV DETTLTEQFG KGITYLVHGV RDMDAIRQLK
ATHNDSMSSE QVDNVRRMLL AMVEDFRCVV IKLAERIAHL REVKDAPEDE RVLAAKECSN
IYAPLANRLG IGQIKWELED FCFRYLHPDE YKKIAKLLHE RRIDREQFID DFVASLHKAM
ADEGIKADIY GRPKHIYSIW RKMQKKSLAF DELFDVRAVR VVVERLQDCY AALGIVHTHF
RHLPDEFDDY VANPKPNGYQ SIHTVVLGPR GKTLEIQIRT RQMHEDAELG VAAHWKYKEG
AVAAGRSSYE GRIAWLRKLI AWQEEMADSG EMLDEVRSQV FDDRVYVFTP KGDVIDLPAG
STPLDFAYHI HSDVGHRCIG AKISGRIVPF TYQLQMGDQI EIITQKQPNP SRDWLNPNLG
YITTSRGRSK IHNWFRKQDR DKNILAGRQM LDDELEHLDI SLKEAEKLLV PRYNMNSMDE
VLAAIGGGDI RLNQMVNFLQ GKLNKPTAEE ADLEALRHLN NKHQPAPRNA SKDSGRIVVE
GVGNLMHHIA RCCQPIPGDQ IIGFITQGRG ISIHRADCEQ LAELESHAPE RIVDAVWGES
YSSGYSLVVR VTANDRSGLL RDITTILANE KVNVLGVASR SDTKKMVATI DMDIEIYNLQ
VLGRVLAKLN QLPDVIDARR LHGN