| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3315 |
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| Symbol | sodC |
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| ID | 5384454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3723891 |
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| End bp | 3724478 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640866330 |
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| Product | copper/zinc superoxide dismutase |
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| Protein accession | YP_001402272 |
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| Protein GI | 153948541 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2032] Cu/Zn superoxide dismutase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.151154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAA GTACATTATT GCTACCTGTT ATTCTTTACT CCAGCGCAAC ACTGGCCGCT
AACATGGCTG GCATGAATGA TAAGGCTGGC ATGAATGATA AGGCCAGTAT GAATGATATG
GCTAGCATGA CTGTGGAAAT CAACGAATCA TTGCCACAAG GTAATGGGAA AGCGCTTGGC
ACCGTGACGG TGACTGAAAC CGCTTATGGC TTACTGTTTA CGCCACATCT CACTGGGCTG
GCTCCGGGAA TTCACGGTTT CCATCTGCAT GAAAAACCCA GTTGTGCTCC GGGGATGAAA
GATGGCAAGG CAGTGCCAGC ATTGGCAGCC GGGGGGCATC TTGACCCAAA TAAGACCGGG
GTACACCTTG GTCCTTACAA CGATAAAGGG CATCTGGGGG ATCTGCCGGG ATTGGTGGTT
AATGCAGATG GCACCGCCAC CTATCCCGTA TTGGCTCCGC GCCTGAAATC GTTGTCAGAG
GTGAAACAGC ATGCGTTAAT GATCCATGCT GGCGGTGATA ATTACTCTGA TCATCCAATG
CCTTTAGGCG GTGGTGGCGC ACGGATGGCA TGTGGAGTCA TTGAGTAA
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| Protein sequence | MKLSTLLLPV ILYSSATLAA NMAGMNDKAG MNDKASMNDM ASMTVEINES LPQGNGKALG
TVTVTETAYG LLFTPHLTGL APGIHGFHLH EKPSCAPGMK DGKAVPALAA GGHLDPNKTG
VHLGPYNDKG HLGDLPGLVV NADGTATYPV LAPRLKSLSE VKQHALMIHA GGDNYSDHPM
PLGGGGARMA CGVIE
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