Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3230 |
Symbol | ffh |
ID | 5384892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3635262 |
End bp | 3636623 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640866239 |
Product | signal recognition particle protein |
Protein accession | YP_001402187 |
Protein GI | 153949054 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0218227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAGA ACTTAACTGA TCGATTGTCG CGCACACTGC GCAATATCAG CGGCCGTGGC CGGCTGACAG AAGAAAATAT TAAAGAAACG CTACGTGAAG TGCGCATGGC ATTACTTGAA GCTGACGTCG CTCTGCCCGT TGTTCGTGAC TTTATAAACC GAGTAAAAGA GCGGGCTGTT GGGCATGAAG TTAATAAAAG TCTGACGCCA GGCCAAGAAT TCGTCAAAAT AGTTAAAAAT GAATTGATCA GCGCCATGGG CGAGGTCAAT AACGAACTGA ATCTGGCTGC ACAACCGCCA GCAGTTGTGT TAATGGCTGG CTTGCAAGGT GCGGGTAAGA CCACCAGTGT AGCGAAACTG GGGAAATTTC TTAAAGAAAA ACAGAAGAAA AAAGTGCTGG TCGTGTCTGC TGACGTTTAT CGCCCTGCGG CGATCAAACA GTTGGAAACC CTGGCTCAGG GTGTTGGCAT TGATTTCTTC CCGTCTGATG CACAGGAAAA ACCGATTGAT ATTGTGAATC GTGCCCTGCA ACAGGCAAAG CTTAAATTTT ATGATGTTCT GATTGTCGAT ACCGCAGGTC GCTTACACGT TGATGAAGCG ATGATGGACG AAATCAAACA GGTTCATGCG GCGATTAAGC CTGTTGAAAC CTTGTTTGTC GTCGATGCGA TGACCGGTCA GGATGCGGCG AATACCGCCA AAGCATTCAA CGAAGCACTG CCACTCACCG GTGTCGTGCT GACTAAAGTG GATGGCGATG CGCGCGGTGG TGCGGCTTTA TCTATCCGCC ATATCACCGG TAAACCTATT AAATTCCTTG GCGTCGGTGA GAAATCTGAT GCACTGGAAC CGTTCCATCC AGACCGAATA GCCTCACGTA TCTTGGGTAT GGGCGATGTG CTGTCGCTGA TTGAAGATAT CGAAAGCAAA GTTGACCGTG CGCAAGCGGA GAAACTGGCA ACAAAACTGA AAAAAGGCGA TGGTTTCGAT CTCAATGACT TCCTCGACCA GTTGAAGCAG ATGCGCAACA TGGGGGGGAT GGCCAGTATG TTGAGTAAAA TGCCAGGGGC AGGTCAGTTG CCAGAAAACG TAAAATCGCA AATGGATGAT AAAGTCACGG TGCGGATGGA GGCGATCATC AATTCTATGA CGCTGAAAGA GCGCGCTAAA CCTGAAATTA TCAAAGGTTC ACGTAAGCGC CGTATCGCAA CCGGTTCTGG TGTGCAGGTA CAGGATGTTA ACCGTTTGCT GAAACAGTTT GATGAAATGC AGCGCATGAT GAAGAAAATG AAAAACGGCG GTTTGGCCAA AATGATGCGT GGCATGAAAG GTATGATGCC ACCCGGGTTC CCAGGTCGCT AA
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Protein sequence | MFENLTDRLS RTLRNISGRG RLTEENIKET LREVRMALLE ADVALPVVRD FINRVKERAV GHEVNKSLTP GQEFVKIVKN ELISAMGEVN NELNLAAQPP AVVLMAGLQG AGKTTSVAKL GKFLKEKQKK KVLVVSADVY RPAAIKQLET LAQGVGIDFF PSDAQEKPID IVNRALQQAK LKFYDVLIVD TAGRLHVDEA MMDEIKQVHA AIKPVETLFV VDAMTGQDAA NTAKAFNEAL PLTGVVLTKV DGDARGGAAL SIRHITGKPI KFLGVGEKSD ALEPFHPDRI ASRILGMGDV LSLIEDIESK VDRAQAEKLA TKLKKGDGFD LNDFLDQLKQ MRNMGGMASM LSKMPGAGQL PENVKSQMDD KVTVRMEAII NSMTLKERAK PEIIKGSRKR RIATGSGVQV QDVNRLLKQF DEMQRMMKKM KNGGLAKMMR GMKGMMPPGF PGR
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