Gene YpsIP31758_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3223 
Symbol 
ID5385589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3631268 
End bp3632035 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content46% 
IMG OID640866232 
Producthypothetical protein 
Protein accessionYP_001402180 
Protein GI153948503 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCTT TACGTCATAC CAAGGCGTTG CCGTTTTATA TCAGCACACT CACTTTATCC 
TTGTTTAGTG CATCAGCGCT TGCTGATGCG ACTCTCTTTA CAGCCTTGGA TGATCCTTCC
TCGGCTAAAA AAAGCTTTGA TGGTTCCGTT GACGCAGGTT ATACCGCTCA GTCCGGCAAT
ACGACAAACT CATCATTAGC GGCTAACTCA ACATTGACTT GGTTCCAGCC CAATACAGCT
TATAGCTTAT GGGGAGCGGC CCGTAACACC AGCGCCAATA ATCAACGTTC TTCAGAACGT
TATCAACTCG GTGGCCGTAC CCGCTATAAT CTGACGGATC GTCATTACAT ATTCGGCCAA
GCCAGTTGGC TAACTGATCG TTATAATGGT TTCGACTCTC GCTCGGTATT AACGACAGGT
TATGGTCGTC AGGTTATGAC AACCCCACTA CACAATCTGC GGGTAGAATT TGGTCCGGGT
GTTCGCCATG ATGAATTTTA TGGCGGTGGC CGAGCGACTA AAGCATTAGC ATATGGTGGG
GCGAACTATA CTTATCAGCT CACGGATAAC ACGGTATTCA GTGAAGGTGT TTCCGCATTA
GCAAACGAAG AAACGACGTT GAACTCAGAA ACAGCGTTGA ATGTTGCTAT CAATAAAAGC
TTCGCATTAC GTTTAGCTTA TATCGCGACC TATAATACTA AGCCGCCAAC CAGTGCGCCC
AAAAACACGG ACACTACGAC GTCAATAACG TTGGTTTACG GCCTGTAA
 
Protein sequence
MFSLRHTKAL PFYISTLTLS LFSASALADA TLFTALDDPS SAKKSFDGSV DAGYTAQSGN 
TTNSSLAANS TLTWFQPNTA YSLWGAARNT SANNQRSSER YQLGGRTRYN LTDRHYIFGQ
ASWLTDRYNG FDSRSVLTTG YGRQVMTTPL HNLRVEFGPG VRHDEFYGGG RATKALAYGG
ANYTYQLTDN TVFSEGVSAL ANEETTLNSE TALNVAINKS FALRLAYIAT YNTKPPTSAP
KNTDTTTSIT LVYGL