| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3215 |
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| Symbol | |
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| ID | 5385818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3622944 |
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| End bp | 3623675 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640866224 |
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| Product | outer membrane protein assembly complex subunit YfiO |
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| Protein accession | YP_001402172 |
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| Protein GI | 153948219 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.00228309 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCGTA TGAAATATCT GGTGGCTGCC GCCACGTTGA GCCTGGTGCT GACCGGTTGC
TCCAGTAACA AGGACGTGGT TCCCGATAAC CCGCCTTCTG AGCTCTATGC TACCGCACAG
CAAAAGTTGC AGGACGGTAA CTTTAAGGGA GCTATTACGC AACTAGAAGC GTTAGATAAC
CGCTATCCTT TTGGGCCTTA CTCCCAGCAG GTTCAGCTTG ATTTGATTTA TGCGTATTAT
AAATCTGCTG ATCTGCCTAT GGCGCAAGCC TCAATCGATC GCTTTATGCG CCTCAATCCC
ACCCATCCTA ACATCGATTA CGTATTATAT ATGCGTGGTT TGACGGACAT GGCTCTGGAT
GACAGCGCGT TGCAAGGCTT TTTCGGAATT GATCGTTCAG ACCGCGATCC GCAACATGCT
CGGGCCGCAT TCCGCGATTT TAACCAGTTG ATTCAAAACT ATCCGAATAG CCAATACGCA
ACTGATGCGC AAAAACGCCT GGTGTTCCTG AAAGATCGTC TGGCCAAATA TGAATTGGCC
GTGGCGCAAT ATTACACTAA ACGAGGTGCT TACGTCGCGG TTGTTAACCG TGTAGATCAA
ATGATGAGAG ATTATCCAGA TACGCAAGCC ACTCGTGATG CCTTGCCGTT GATGGAAAAT
GCTTATAAGC AGCTGCAACT GAATGCTCAG GCAGATAAAG TCGCGAAGAT AATTGCGGCC
AATCCAGCCT AA
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| Protein sequence | MTRMKYLVAA ATLSLVLTGC SSNKDVVPDN PPSELYATAQ QKLQDGNFKG AITQLEALDN
RYPFGPYSQQ VQLDLIYAYY KSADLPMAQA SIDRFMRLNP THPNIDYVLY MRGLTDMALD
DSALQGFFGI DRSDRDPQHA RAAFRDFNQL IQNYPNSQYA TDAQKRLVFL KDRLAKYELA
VAQYYTKRGA YVAVVNRVDQ MMRDYPDTQA TRDALPLMEN AYKQLQLNAQ ADKVAKIIAA
NPA
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