| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3181 |
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| Symbol | |
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| ID | 5385893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3585675 |
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| End bp | 3586364 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866188 |
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| Product | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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| Protein accession | YP_001402141 |
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| Protein GI | 153949004 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4229] Predicted enolase-phosphatase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCAGG TGATTGTTAC CGATATTGAA GGCACCACCA CTGACATCCG TTTTGTCCAT
CAAGTGCTGT TTCCTTATGC CCGTGAGCGG TTGACACCTT TCTTACGTGC GCATCAGCAG
GACGACGATA TCGCTGCTCT ACTGGTCGAT TTACGCCGCG AAATTGCTCA ACCGGATGCC
GATATTGAAA CATTGATTAC CGTTTTGCAT GGTTTTATGG ACGAAGACCG CAAATCTACC
GTATTGAAGG CCATTCAAGG CATTATCTGG CGCACGGGTT ACTTGCAAGC GGATTTTCGT
GGCCACGTGT ATCCGGAAGT TGCCCAACAA CTGGCGGATT GGCACCAACA GGGGCTGAAG
TTGTATGTCT ATTCTTCTGG TTCAGTTGCG GCACAGAAGT TGTTATTTGG CTACAGCGAT
GCTGGGGATT TATGCCCGCT GTTCAGTGGC TACTTTGATA CCCATGTGGG GGCAAAACGA
GACGTGAGCG CTTATCAGAA GATTGCCAAC CAACTGGGTA TTGCGCCGCA GGCACTGCTA
TTTTTATCCG ATATTCGCCA AGAACTGGAT GCCGCACAGC TGGCTGGCTG GCATACCTGC
CAGTTGATTC GTGATCTACC CGATAATGAC AGCGCTCATC CACAAGTTAA TCGTTTTGAT
CAGATTGTTT TAAGTCTGTT TACTGAATGA
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| Protein sequence | MIQVIVTDIE GTTTDIRFVH QVLFPYARER LTPFLRAHQQ DDDIAALLVD LRREIAQPDA
DIETLITVLH GFMDEDRKST VLKAIQGIIW RTGYLQADFR GHVYPEVAQQ LADWHQQGLK
LYVYSSGSVA AQKLLFGYSD AGDLCPLFSG YFDTHVGAKR DVSAYQKIAN QLGIAPQALL
FLSDIRQELD AAQLAGWHTC QLIRDLPDND SAHPQVNRFD QIVLSLFTE
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