Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3175 |
Symbol | |
ID | 5387226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3579513 |
End bp | 3581303 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640866182 |
Product | putative lipoprotein |
Protein accession | YP_001402135 |
Protein GI | 153948143 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.849554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGATT GCTATTGCCA TGGCATGTTA TGGTTCCCAT TAAAATTCAG TTTATTAGCT TTATTTTCTC TTTCTTGCTC ACCATTAATC GCCACACCTC AAGTGCTAAA TGTGCCAAAC GCAGGGGCGA TTAGTAATGA AATTAGGCAA ACAACAATAG AGCCATTGAA CGCCCCAGAG GAAACGGATA TCAAGCTTCC TCAATTAAAT AAGCCCACGC CACCAGAAGG GGGACTCGCG ACTGAACGCA TTACCCTGCA CAGGGTTAGG TTTGAAGGCG ATGTCTCGTT ATTTCAGCCT GGTATTACCG CTGACAATAA GGATTTACAG GCGCTGATTA CCCCTTGGTT AAATCGGTCA CTCACATTTA ACGATTTACA AGCCATGACT TTTGCCGTGA CTCGCTTCTA TCGGAAAAAA GGGTGGGTCG CAGCTCAGGC AATATTACCA CCACAAACGA TTCGGGACGG TATTATTGTG GTGCGCGTTA TCGCGGGCCG ATTAGATAAG CCTCAGATAA ATAACCAAAG TAGTTTGAAT TCTCACTTTA TCACCACGGT GATTGAAAGT AATAGCTGCA GTAAAAAAAA TGGGATCTTT GGTGATAAAG ATTGTGCCGC GTCTCCCGTT GAATTATCTC GCCTTGAACG CACGGCGCTA ATTTTGAATG AAATACCGGG CGTTGAGGCT TCTTTGGCAT TAAAACCGGG CACTCAATCT GGAATGACTC GGATTTATGC TGATGTTACA CCCGGAAAAA AAATGATGGC TTATCTTGCG GCCGATAATC AGGGAAATGA TTATTCCGGT CATAATCGTT TGTTAACCGG CGGTGTGCTT AATAACCTCA CTGGCTGGGG AGATCAATTA CGGGCAGATT TAATTTTATC CAGCTCGGCA GATGTCTTTA ATGGTTTACT GGATTATAAC TTCCCCATTA ATAGCTATGG TACCCGGGCT GCACTTAATT ATAGCTACCT GGATTATACG TTAACGGGGC CTTTCTCCGT ATTAGATGCA CGTGGTCACT CTACTACCTG GGGCATCAAT TTACGACATC CATGGATACG CACCTCTGCT GCACGAATTG ATGTCAATGC GGGTTATTAT CAGGCCAGAA TGCGTGATGC ATTAATCTTG TTACCAGAAC AAAAACGTAA CCTGAATGCG GGCGAATTTG GTATCAGTGG CACTTTTACT GCCTTACCCC GTGGGCTCAG TAATTTCAAT TTACTGGGCA CGGCAGGGGA TCTTGCACTG GATGACGAAT ACAGCCAAAG CATAAATACG CTGACCCATG TGAGCGGTAA TTTTAGCCGC TTTAATTATC GCGTCGGCCA TGATCAGGGC ATTGGGTCTC ACGTCTCTTT CTTTAATCAA TTTACCGGTC AAATGGCCAG TAAAAATCTG GATAGTTCGC AAAAATTACT CTTGGGCGGG CCACTGGCGG TTCGTGCCTA TGGTATTGGC GACGGTTCTG TCGATAAAGG GACGATTTTT ACCACGGAAT TACGCACACG CTGGCAGCCT GATTTTCCTG ACTGGGCCGG CTATGGGCAT CAAATTACCG TAGCGGCGTT TTTTGACCAA GGGTGGGGGG CTTATTATCG CCAGCCTATC GTGGGCCTCT CTGAAAATAA TATCAACATA TCTGGCTTTG GTTCCTATAT CACTTTCGCA CGCCCGGCAG ATTATTTTTT GAATCTGACC TGGGCACACC GAACCGGTCA GGCAGTGACC CGTCATCAAG ATAACGATCA GCTCTGGTTA AGTGCTTATA AGATGTTTTA G
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Protein sequence | MRDCYCHGML WFPLKFSLLA LFSLSCSPLI ATPQVLNVPN AGAISNEIRQ TTIEPLNAPE ETDIKLPQLN KPTPPEGGLA TERITLHRVR FEGDVSLFQP GITADNKDLQ ALITPWLNRS LTFNDLQAMT FAVTRFYRKK GWVAAQAILP PQTIRDGIIV VRVIAGRLDK PQINNQSSLN SHFITTVIES NSCSKKNGIF GDKDCAASPV ELSRLERTAL ILNEIPGVEA SLALKPGTQS GMTRIYADVT PGKKMMAYLA ADNQGNDYSG HNRLLTGGVL NNLTGWGDQL RADLILSSSA DVFNGLLDYN FPINSYGTRA ALNYSYLDYT LTGPFSVLDA RGHSTTWGIN LRHPWIRTSA ARIDVNAGYY QARMRDALIL LPEQKRNLNA GEFGISGTFT ALPRGLSNFN LLGTAGDLAL DDEYSQSINT LTHVSGNFSR FNYRVGHDQG IGSHVSFFNQ FTGQMASKNL DSSQKLLLGG PLAVRAYGIG DGSVDKGTIF TTELRTRWQP DFPDWAGYGH QITVAAFFDQ GWGAYYRQPI VGLSENNINI SGFGSYITFA RPADYFLNLT WAHRTGQAVT RHQDNDQLWL SAYKMF
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