Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3171 |
Symbol | fadE |
ID | 5385978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3568365 |
End bp | 3570812 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640866178 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001402131 |
Protein GI | 153947518 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTTC TTAGCATTGT TGCCTTACTG GTTCTTATTA GTGTGTTGTT CTATCACCGG GTGAACCTTT ATCTCAGCAG TTTAATTCTT CTGGTTTACA CCGCCGCTTT GGGCGCCTCG CAGTTATGGT CATTCTGGGT ATTATTACCA ATGGTGATTA TTCTGTTGCC ACTGATCCTA ACGCCGCTGC GCAAGTCACT GTTCTCTGCG CCAGCATTAC GGATTTTCCG TAGCGTCATG CCTGCTATGT CACGTACAGA AAAAGAAGCG ATTGATGCAG GGACTACCTG GTGGGAAGGT GATTTGTTCC GAGGGGCTCC TGACTGGAAA AAATTACACA ACTATCCAAA ACCGCAATTA ACCGCCGAAG AGCAAGCCTT TATCGATGGG CCGGTTGAAG AAGCCTGTCG TATGGCTAAT GACTTCCAGA TAACCCATGA ACTGGCTGAT TTGCCACCAG AATTATGGGA TTACCTGAAA GAAAAACGCT TCTTCGCGAT GATCATTAAG AAAGAATATG GGGGTCTTGA ATTTTCTGCT TATGCTCAGG CCCGCGTGTT ACAGAAACTA GCCGGGGTCT CAGGTATTCT GGCCATCACC GTTGGCGTAC CAAACTCCCT TGGCCCAGGT GAATTATTGC AACATTACGG CACTGAAGAG CAAAAAAATC ATTATCTGCC AAGATTAGCC CGGGGTGACG AGATCCCTTG CTTTGCACTA ACCAGCCCGG AAGCCGGTTC TGATGCCGGT GCGATCCCTG ATGTTGGTAT TGTCTGTATG GGCGAGTGGC AAGGTAAACA GGTTCTCGGC ATGCGCCTAA CCTGGAACAA GCGCTATATT ACGCTGGCCC CCATCGCGAC GGTTCTGGGG CTGGCCTTCA AATTATCGGA CCCCGAACAC TTACTGGGCG ATACGGTAGA CTTGGGGATT ACCTGTGCAC TGATCCCAAC CCATACACCA GGAGTAGAGA TCGGGCATCG TCACTTCCCG CTCAATATAC CGTTCCAAAA TGGCCCTACC CGCGGTAACG ATATTTTTGT CCCCATTGAT TACATCATCG GCGGCCCTCA AATGGCCGGT CAAGGCTGGC GGATGCTGGT GGAATGCCTG TCTGTGGGGC GTGGAATCAC CTTGCCTTCC AATGCCACTG GTAGCCTGAA AAGTGTGGCG ATGGGGATCG GTGCTTACGC TTATATTCGC CGTCAATTCA AAATCTCCAT CGGTAAGATG GAGGGGATTG AAGAGCCACT GGCGCGGATC GCCGGTAACA CTTATGTGAT GGATGCAGCC GCAACTTTAA TCACCAGCGG CATTATGATG GGCGAGAAAC CGGCCGTCTT GTCTGCCATT GTTAAATATC ACTGTACACA CCGTGGTCAA CGCGCCGTGA TGGATGCCAT GGATATCGCC GGTGGTAAAG GGATCTGCCT TGGCCCCGCT AACTTTGTCG CCCGTGGTTA TCAGGGCGCA CCCATCGGTA TCACCGTCGA AGGCGCAAAT ATTCTGACCC GCAGTATGAT TATCTTTGGT CAGGGTGCTA TCCGTTGCCA TCCATTTGTT CTCGATGAGA TGGCGGCTGC GCAATCCAAT GACGTTGCCG CTTTCGATAA AGCCCTGTTT GGTCACTTGG GCCACGTCGG TAGTAGTATG GTACGCAGCT TCTGGCTGGG CCTGACCAAT GGCCGCACCA GTGCAACACC AGTCAAAGAC AGCACCCGTC GTTATTATCA ACAACTAAAC CGTCTGAGCG CTAACTTGGC CTTGCTGTCT GATGTTTCAA TGGGCGTGCT GGGTGGTAGC CTAAAACGTC GCGAACGTAT CTCTGCCCGT TTGGGTGATA TCCTCAGCCA ACTGTATTTA GCATCCGCCA CACTGAAACG CTATGAAGAT GAAGGCCGTC AGAAAGAGGA TCTGCCGTTG GTACATTGGG GGGTACAAGA TGCTCTGTAT CAGGCCGAAC AAGCACTGGA TGACTTGCTG CGTAACTTCC CGAATAGCGT GATTGCTGGA TTGATGCGCG TCGTGGTCTT CCCGTTGGGC CGTGTACATC GGGCACCGTC CGATCATCTG GATCACCAGT TGGCGCAATT GCTACAAGTT CCATCAGCCA CCCGTAGCCG TATCGGTCGT GGTCAGTACC TGACACCAAG TGAATTTAAC CCGGTAGGGT TATTGGAAGC GGCCTTACTG GATGTGATTG CCGCAGAACC GATTCACAAA CGCCTGAGTA AAGAAGCGGG TAAGAGCCTG CCCTTTACTC GCTTGGATCA GTTAGCTAAA CACGCCTTGG CAGAAGGGAA AATCAGCGCC GAAGAGGCCG CGTTGCTGAC TAAAGCAGAA AACAGCCGCC TGCGTTCTAT TAATGTGGAT GAGTTTGACG CCAGCGCCTT GGCAGCAAAC CCAGTAGTCA AAAAACCGGC TAAACAGCAG CAAACTGAAG CCGCATGA
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Protein sequence | MIVLSIVALL VLISVLFYHR VNLYLSSLIL LVYTAALGAS QLWSFWVLLP MVIILLPLIL TPLRKSLFSA PALRIFRSVM PAMSRTEKEA IDAGTTWWEG DLFRGAPDWK KLHNYPKPQL TAEEQAFIDG PVEEACRMAN DFQITHELAD LPPELWDYLK EKRFFAMIIK KEYGGLEFSA YAQARVLQKL AGVSGILAIT VGVPNSLGPG ELLQHYGTEE QKNHYLPRLA RGDEIPCFAL TSPEAGSDAG AIPDVGIVCM GEWQGKQVLG MRLTWNKRYI TLAPIATVLG LAFKLSDPEH LLGDTVDLGI TCALIPTHTP GVEIGHRHFP LNIPFQNGPT RGNDIFVPID YIIGGPQMAG QGWRMLVECL SVGRGITLPS NATGSLKSVA MGIGAYAYIR RQFKISIGKM EGIEEPLARI AGNTYVMDAA ATLITSGIMM GEKPAVLSAI VKYHCTHRGQ RAVMDAMDIA GGKGICLGPA NFVARGYQGA PIGITVEGAN ILTRSMIIFG QGAIRCHPFV LDEMAAAQSN DVAAFDKALF GHLGHVGSSM VRSFWLGLTN GRTSATPVKD STRRYYQQLN RLSANLALLS DVSMGVLGGS LKRRERISAR LGDILSQLYL ASATLKRYED EGRQKEDLPL VHWGVQDALY QAEQALDDLL RNFPNSVIAG LMRVVVFPLG RVHRAPSDHL DHQLAQLLQV PSATRSRIGR GQYLTPSEFN PVGLLEAALL DVIAAEPIHK RLSKEAGKSL PFTRLDQLAK HALAEGKISA EEAALLTKAE NSRLRSINVD EFDASALAAN PVVKKPAKQQ QTEAA
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