Gene YpsIP31758_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3145 
Symbol 
ID5387774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp3541117 
End bp3541731 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content42% 
IMG OID640866152 
Producthypothetical protein 
Protein accessionYP_001402105 
Protein GI153947871 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.725921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTCACA TTCTCTGGTC ACTGGATAGC ACGGTAAAAA ATCAAAACCA TGTCGTATCC 
TATGATCTCT CCGCTCAAAT ATTACAGGTT GTCATGCAGG CCGCAGCAGA TAAAAAACTC 
ACTAATATTG AGATACAACA AGGGCTGGCT GAATCATTGC CTTTTGCTGA TCAAAGCTTT 
GATATTGTTA TCAGCCGTTA TTCTGCACAC CATTGGCACG ATGTTGGGAA AGCTTTACGT 
GAAGTTAAGC GGGTATTACG GCCCGGTGGA AAAGTCATCT TCATGGATGT GGTTTCTCCC 
GGACATCCGG TATTGGATAT CTATTTGCAA ACAGTAGAAG TCTTACGTGA TACCTCGCAT 
GTGCGAAATT ACTCTCCTGG AGAATGGCTA TCTTTATTTA CCGAGGGTGG GTTAGTAATA 
AATGAAGTAA CTTCTGACCG CTTGTATTTG GAGTTCAGCA GTTGGATTGC CAGAATGCGT 
ACACCTGTAC ATTTTGCTAC GGCTATTCGC GAGTTACAAA AGTTAGCATC TGACGGTGTC 
ATTAATCACT ATGCTATTCA GGCTGATGGT TCCTTTACCA GCGATATCAT GATGATTGTT 
GCAGTAAGAG ACTAA
 
Protein sequence
MLHILWSLDS TVKNQNHVVS YDLSAQILQV VMQAAADKKL TNIEIQQGLA ESLPFADQSF 
DIVISRYSAH HWHDVGKALR EVKRVLRPGG KVIFMDVVSP GHPVLDIYLQ TVEVLRDTSH 
VRNYSPGEWL SLFTEGGLVI NEVTSDRLYL EFSSWIARMR TPVHFATAIR ELQKLASDGV 
INHYAIQADG SFTSDIMMIV AVRD