Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3143 |
Symbol | aroL |
ID | 5386232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3539058 |
End bp | 3539582 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640866150 |
Product | shikimate kinase II |
Protein accession | YP_001402103 |
Protein GI | 153947050 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.770724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAA CTATCTTCAT GGTAGGCGCG CGCGGTGCGG GTAAGACCAC TATTGGGAAG GCATTGGCGC AGGCATTGGG GTATCGGTTT GTTGATACAG ATCTATTTAT GCAACAAACC TCACAAATGA CCGTGGCTGA AGTTGTTGAG AGTGAAGGTT GGGATGGTTT TCGTCTACGT GAAAGCATGG CACTACAGGC AGTAACGGCA CCTAAAACAG TCATTGCCAC TGGTGGTGGT GCGGTACTGT CCAGTGAAAA CCGTGCATTC ATGCGTGATC ATGGGCGAGT TATTTATCTG CGGGCATCAG CAGCCGTATT GGCAAAGCGG CTAGCAGAAG ATCCTGAAGA GGCTCAGCGG CCAAGTTTAA CCGGTAAACC CATCGTTGAA GAAATGCTGG ATGTGTTGGC TAGCCGTGAA GCATTGTATC AGGACGTCGC CCATCATGTA CTTGATGGAA CGCAAACTCC GTCGCTGGTT GTCGAACAAA TTTTACAGAT GTTGACTGGT GAGATGGTCA AATAA
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Protein sequence | MTQTIFMVGA RGAGKTTIGK ALAQALGYRF VDTDLFMQQT SQMTVAEVVE SEGWDGFRLR ESMALQAVTA PKTVIATGGG AVLSSENRAF MRDHGRVIYL RASAAVLAKR LAEDPEEAQR PSLTGKPIVE EMLDVLASRE ALYQDVAHHV LDGTQTPSLV VEQILQMLTG EMVK
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