Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3126 |
Symbol | |
ID | 5386964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3516906 |
End bp | 3517508 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640866133 |
Product | anti-oxidant AhpCTSA family protein |
Protein accession | YP_001402086 |
Protein GI | 153947559 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.183038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCTGG TAACTCGTCA AGCCCCTGAT TTTACAGCGG CTGCTGTTCT TGGTAACGGC GAAATCGTTG AAAACTTTAA CCTGAAAAAG CACCTGAACG GCAGACCAGC CGTCCTATTC TTCTGGCCAA TGGACTTTAC TTTCGTTTGC CCTTCAGAAT TGATCGCTTT CGACCATCGT TATGAAGAAT TCCAAAAACG TGGTGTTGAA GTTGTTGGTG TTTCTTTCGA TTCAGAGTTT GTGCATAACG CATGGCGTAA AACCCCAGTG GATAAAGGCG GTATTGGCGA AGTTAAATAC CCAATGGTTG CGGATATCAA ACGTGAAATC CAGAAAGCTT ACGGTATTGA GCACCCAGAT GCTGGCGTTG CACTGCGTGG TTCATTCCTG ATCGACAAAA ATGGTATTGT TCGCAGCCAA ATCGTTAACG ACCTGCCAAT CGGCCGTAAC ATCGACGAAA TGATCCGTAC CGTTGATGCA TTGCAATTCC ACGAAGAACA CGGCGAAGTT TGCCCTGCAC AGTGGGAAAA AGGCAAAGCA GGTATGGGCG CATCCCCAGA CGGCGTAGCT AAATACCTGT CTGAGAACGC ATCTAAGCTG TAA
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Protein sequence | MVLVTRQAPD FTAAAVLGNG EIVENFNLKK HLNGRPAVLF FWPMDFTFVC PSELIAFDHR YEEFQKRGVE VVGVSFDSEF VHNAWRKTPV DKGGIGEVKY PMVADIKREI QKAYGIEHPD AGVALRGSFL IDKNGIVRSQ IVNDLPIGRN IDEMIRTVDA LQFHEEHGEV CPAQWEKGKA GMGASPDGVA KYLSENASKL
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