Gene YpsIP31758_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3123 
Symboltgt 
ID5386327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3513496 
End bp3514620 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content49% 
IMG OID640866130 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_001402083 
Protein GI153948646 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00561158 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTACG AATTACAAAA AACTGATGGG CGCGCCCGCC GTGGTCGGCT GGTGTTTGAG 
CGTGGCGTGG TCGAAACCCC GGCCTTTATG CCCGTTGGGA CGTATGGCAC CGTGAAAGGG
ATGACACCGG AAGAAGTAAA AGAGACCGGT GCGCAGATCC TGTTAGGTAA CACCTTCCAT
CTATGGTTGC GTCCAGGCCA GGAAATCATG AAGCTGCACG GCGACTTACA TGATTTCATG
CAATGGCACG GCCCGATCCT GACCGATTCC GGCGGGTTCC AGGTCTTTAG CCTTGGCGCG
ATGCGTAAAA TTAAAGAAGA AGGGGTTCAT TTTAAAAACC CAATCAATGG CGATTCGGTG
TTCCTTAGCC CTGAAAAGTC GATGGAAATT CAGTACGATC TCGGTTCTGA TATCGTCATG
ATATTTGATG AGTGTACACC TTATCCTGCC GATTGGGATT ACGCTAAACG TTCGATGGAA
ATGTCACTGC GCTGGGCTGC CCGTAGCCGC CAGCGCTTTG ATGAGCTGAA TAACAAGAAT
GCATTATTCG GTATCATCCA AGGCGGGGTT TACGAAGATT TACGTGATGT GTCAGTAAAA
GGGCTGGTAG ATATCGGCTT TGATGGTTAC GCTGTTGGCG GCTTGGCGGT CGGTGAACCA
AAAGAAGATA TGCACCGTAT CCTTGAACAT GTCTGCCCAC AGATCCCAGA AGATAAACCT
CGTTACCTGA TGGGCGTAGG GAAACCCGAG GATCTGGTTG AGGGGGTGCG CCGTGGTATT
GACATGTTTG ATTGTGTCAT GCCAACGCGT AATGCCCGAA ATGGTCATTT GTTTGTGACT
GATGGTGTGG TAAAAATCCG TAATGCGAAG CATAAGGATG ATACGGCAAC ACTGGATGAG
CACTGTGATT GCTACACGTG TCGCCATTAT AGCCGTGCCT ACTTGCATCA TCTCGATCGT
TGCAATGAAA TACTGGGTGC ACGATTGAAC ACTATTCATA ACCTGCGTTA TTACCAGCGC
TTAATGGCGG GTTTACGTCA GGCTATTGAA GAGGGTAAAT TAGAACACTT TGTTGAAGAT
TTCTATGGTC GGATCGGGAA GCCAGTTCCA CCATTAAACG TTTGA
 
Protein sequence
MKYELQKTDG RARRGRLVFE RGVVETPAFM PVGTYGTVKG MTPEEVKETG AQILLGNTFH 
LWLRPGQEIM KLHGDLHDFM QWHGPILTDS GGFQVFSLGA MRKIKEEGVH FKNPINGDSV
FLSPEKSMEI QYDLGSDIVM IFDECTPYPA DWDYAKRSME MSLRWAARSR QRFDELNNKN
ALFGIIQGGV YEDLRDVSVK GLVDIGFDGY AVGGLAVGEP KEDMHRILEH VCPQIPEDKP
RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFVT DGVVKIRNAK HKDDTATLDE
HCDCYTCRHY SRAYLHHLDR CNEILGARLN TIHNLRYYQR LMAGLRQAIE EGKLEHFVED
FYGRIGKPVP PLNV