Gene YpsIP31758_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3096 
SymbolampG 
ID5385854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3487033 
End bp3488511 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content49% 
IMG OID640866103 
Productmuropeptide transporter 
Protein accessionYP_001402056 
Protein GI153947355 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00901] AmpG-related permease 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0966625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAATC GCTATTCAAA CCTTTTTACC CAACGTAACT CTATCATTCT TCTGTTATTG 
GGCTTTGCCT CAGGCCTTCC TTTAGCGCTG ACCAGTGGCA CACTGCAGGC ATGGATGACC
GTGGAAAATG TCAATCTTAA GACGATTGGT ATTTTCTCGC TGGTTGGCCA AGCCTATGTC
TTTAAGTTTC TTTGGTCCCC GCTGATGGAC CGCTACACGC CGTCCTTTTT AGGGCGTCGG
CGCGGTTGGT TACTGGTAAG CCAGCTATTA CTCATTATTG CCATTATCGC GATGGGCTTT
ATGGAGCCTG CCAAACATTT ATGGTGGCTG GCAGCGGTCG CGGTATTAGT CGCATTTTGT
TCAGCTTCTC AAGATATCGT TTTTGATGCT TATAAAACTG ACTTGCTTAC CACTGAAGAG
CGCGGTACGG GGGCGGCAGT ATCGGTACTA GGCTACCGCC TGGCAATGCT GGTTTCCGGT
GGGTTAGCGT TGTGGATTGC AGATCGCTAT CTTGGCTGGC AATCAACTTA TTGGCTAATG
GCCGGATTGA TGTTGATTGG GGTATTCGCT ACCTTGCTCG CCCCTGAACC CGATATCCGA
ATTGCCCCAC CAAAAACATT GGAGCAGGCC ATTGTCGCTC CATTACGTGA TTTTTTTGGT
CGTAATAATG CTTGGCTGAT CTTGCTGCTT ATTGTGTTTT ACAAAATGGG AGATGCGTTT
GCCGCAAGCC TGAGTACAAC TTTTCTGATA CGTGGCGTCG GGTTTGATGC CGGTGAAGTG
GGGTTGGTGA ATAAAACGCT GGGGCTGATC GCCACGATTA TTGGCGCTCT CTATGGCGGC
CTATTAATGC AACGGCTGAG CTTATTCCGT GCCTTAATGA TTTTCGGTAT TTTACAAGCA
GTTTCTAACA TGGGCTATTG GCTACTCGCT ATCACTGATA AAAATATATT CTCCATGGGC
AGTGCCATAT TTTTGGAGAA CTTATGCGGA GGGATGGGAA CAGCAGCCTT TGTCGCATTA
CTCATGACAC TCTGTAACAA GTCCTTCTCC GCCACACAGT TTGCCCTCTT ATCGGCCCTC
TCTGCTGTGG GCCGGGTTTA TGTTGGCCCG ATTGCCGGTT GGTTTGTAGA GGCCCATGGC
TGGCCACTTT TCTATTTATT CTCTATTGCC GCCGCCATTC CAGGGCTATT GCTACTGTAT
GTCTGCCGTC AAACGCTGGA TCATACGCAG AAAACCGACG AATTTATGCC CCGGATCGCA
TTTAAAACGG CTTACCGTTG GGCACTACGT TTACTCATTA TTGGCGGTCT GTTGCTGTCT
GTGTGGCTAA TCTTGTTGAT ATGTAACGCA CTAGATTGGA CCTCTGCACC CCAAGTGGCC
GATACCTTAC TCTTGAGGGG GATTCAGTTC AGCATCGTCG GGATGACTCT CGGGGGGCTG
CTGGATTATT TAGCGCTCAG ACGGCAAAAA CTAGCCTAG
 
Protein sequence
MPNRYSNLFT QRNSIILLLL GFASGLPLAL TSGTLQAWMT VENVNLKTIG IFSLVGQAYV 
FKFLWSPLMD RYTPSFLGRR RGWLLVSQLL LIIAIIAMGF MEPAKHLWWL AAVAVLVAFC
SASQDIVFDA YKTDLLTTEE RGTGAAVSVL GYRLAMLVSG GLALWIADRY LGWQSTYWLM
AGLMLIGVFA TLLAPEPDIR IAPPKTLEQA IVAPLRDFFG RNNAWLILLL IVFYKMGDAF
AASLSTTFLI RGVGFDAGEV GLVNKTLGLI ATIIGALYGG LLMQRLSLFR ALMIFGILQA
VSNMGYWLLA ITDKNIFSMG SAIFLENLCG GMGTAAFVAL LMTLCNKSFS ATQFALLSAL
SAVGRVYVGP IAGWFVEAHG WPLFYLFSIA AAIPGLLLLY VCRQTLDHTQ KTDEFMPRIA
FKTAYRWALR LLIIGGLLLS VWLILLICNA LDWTSAPQVA DTLLLRGIQF SIVGMTLGGL
LDYLALRRQK LA