| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3091 |
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| Symbol | clpX |
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| ID | 5385109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3481386 |
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| End bp | 3482657 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640866098 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001402051 |
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| Protein GI | 153950055 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000000179852 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGATA AGCGCAAAGA CGGTTCAGGA AAGCTGCTGT ATTGCTCTTT CTGCGGCAAA
AGCCAGCATG AAGTGCGTAA GCTAATTGCC GGGCCGTCAG TGTATATCTG CGATGAATGT
GTCGATTTGT GTAATGACAT TATTCGCGAA GAGATTAAGG AAGTTTCCCC GCACCGGGAT
CGCAGTTCAC TGCCAACACC GCATGAAATT CGCCACCACC TTGATGATTA TGTCATCGGG
CAGGAACCTG CGAAAAAAGT GCTGGCAGTT GCGGTGTATA ACCACTACAA GCGTCTGCGT
AACGGTGATA CCAGTAATGG TATTGAACTG GGTAAAAGTA ATATTTTGCT GATTGGTCCG
ACAGGGAGCG GTAAAACGCT GTTGGCGGAA ACATTGGCTC GCCTCCTGGA CGTGCCATTT
ACTATGGCGG ACGCGACTAC GCTGACTGAA GCTGGCTATG TGGGTGAAGA TGTTGAAAAC
ATCATTCAGA AGCTACTACA GAAGTGTGAT TACGACGTAC AGAAAGCGCA ACGTGGTATC
GTCTATATCG ATGAAATTGA TAAAATTTCA CGCAAGTCTG ATAATCCGTC GATCACCCGT
GATGTCTCAG GTGAAGGCGT ACAGCAGGCT CTGCTGAAAT TGATCGAAGG GACCATTGCT
GCGGTACCGC CACAAGGTGG TCGTAAGCAT CCACAGCAGG AGTTTTTGCA GGTTGATACC
TCCAAGATTC TGTTTATCTG TGGTGGTGCT TTTGCCGGTT TGGACAAAGT TATTGGGCAG
CGTATTAATA CCGGCTCAGG TATCGGCTTT GGCGCAGTGG TAAAAGGCCA ATCAGAAAAG
GCAACAGAAG GTGAGTTGCT GAGTCAGGTT GAGCCAGAAG ACCTGATCAA ATTTGGCTTA
ATCCCTGAAT TTATCGGTCG TTTGCCGGTA GTCGCCACAT TGAGCGAACT GAGTGAGGAC
GCACTGATCC AGATCCTTAA AGAGCCGAAA AATGCACTGA CCAAGCAATA TCAGGCATTA
TTCAGCCTTG AAGGTGTTGA ACTCGAGTTC CGTGACGAAG CATTGACTGC GATTGCCAAG
AAAGCGATGG CGCGTAAAAC AGGTGCTCGT GGGCTGCGCT CCATTGTCGA AGGTGCTTTG
CTGGATACGA TGTATGATCT GCCATCAATG GATAGCGTAG AGAAGGTGGT CGTGGATGAA
TCAGTTATTG CTGGTCAATC TGCGCCGATG CTGATTTATG GTCAGCCCGA AGCGCAAGCT
TCTGGTGAAT AA
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| Protein sequence | MTDKRKDGSG KLLYCSFCGK SQHEVRKLIA GPSVYICDEC VDLCNDIIRE EIKEVSPHRD
RSSLPTPHEI RHHLDDYVIG QEPAKKVLAV AVYNHYKRLR NGDTSNGIEL GKSNILLIGP
TGSGKTLLAE TLARLLDVPF TMADATTLTE AGYVGEDVEN IIQKLLQKCD YDVQKAQRGI
VYIDEIDKIS RKSDNPSITR DVSGEGVQQA LLKLIEGTIA AVPPQGGRKH PQQEFLQVDT
SKILFICGGA FAGLDKVIGQ RINTGSGIGF GAVVKGQSEK ATEGELLSQV EPEDLIKFGL
IPEFIGRLPV VATLSELSED ALIQILKEPK NALTKQYQAL FSLEGVELEF RDEALTAIAK
KAMARKTGAR GLRSIVEGAL LDTMYDLPSM DSVEKVVVDE SVIAGQSAPM LIYGQPEAQA
SGE
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