Gene YpsIP31758_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3090 
Symbollon 
ID5384372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3478837 
End bp3481191 
Gene Length2355 bp 
Protein Length784 aa 
Translation table11 
GC content48% 
IMG OID640866097 
ProductDNA-binding ATP-dependent protease La 
Protein accessionYP_001402050 
Protein GI153947460 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.93102e-15 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTG AGCGTTCCGA ACGCATAGAA ATCCCCGTAT TGCCTCTGCG CGATGTGGTG 
GTTTATCCGC ATATGGTGAT CCCACTATTT GTTGGCCGGG AAAAGTCGAT TCGGTGCCTG
GAAGCTGCGA TGGACCATGA TAAAAGAATC ATGCTGGTTG CGCAGAAAGA AGCTTCGACC
GACGAACCTG GTATCAACGA TCTGTTTTCG GTGGGTACCG TAGCCTCGAT TTTGCAAATG
CTGAAGTTGC CTGACGGCAC AGTAAAAGTG TTGGTTGAAG GTTTACAGCG TGCGCGTATC
ACCACGCTTT CTGACAGTGG CGAGCATTTT GCTGCCCAAG CGGAATACCT TGAATCACCC
GTGATGGATG ATCGCGAGCA AGAAGTCTTG GTGCGTACCG CGATTAATCA GTTTGAAGGT
TATATCAAAC TGAACAAAAA AATCCCGCCG GAAGTGCTGG CTTCGCTGCA CAGTATTGAT
GATGCGGCAC GTCTTGCTGA TACCATCGCT GCACATATGC CATTGAAGTT AAATGATAAA
CAAGCTGTTC TGGAAATGTT CGATATCACC GAACGTCTGG AATACTTGAT GGCGATGATG
GAGTCGGAAA TCGATCTGTT ACAGGTTGAA AAGCGGATCC GTAATCGTGT TAAAAAACAG
ATGGAAAAGA GCCAGCGTGA GTACTATCTG AATGAGCAAA TGAAAGCTAT TCAGAAAGAA
CTGGGCGAGA TGGACGATAC GCCAGACGAG CATGAAGCGC TGAAGCGTAA AATTGAAGCG
GCTAAAATGC CGAAAGATGC GCGTGAAAAA ACCGAAGCGG AACTGCAAAA ACTGAAAATG
ATGTCGCCAA TGTCTGCGGA AGCAACCGTG GTACGTGGTT ACATCGACTG GATGTTGCAG
GTTCCTTGGA ATAGCCGCAG CAAAGTTAAA AAAGACCTGG TTAAAGCACA AGAAGTTCTG
GATACCGACC ACTACGGTTT AGAGCGTGTT AAAGATCGTA TCTTGGAATA TCTCGCAGTC
CAGAGCCGGG TCAGCAAAAT TAAAGGGCCC ATCCTCTGCT TGGTTGGGCC TCCTGGGGTC
GGTAAAACCT CTCTAGGGCA GTCAATTGCT AAGGCAACGG GCCGCCAGTA TGTGCGTATG
GCATTGGGTG GGGTGCGTGA TGAAGCTGAA ATCCGTGGTC ACCGTCGTAC GTATATTGGT
TCTATGCCGG GTAAATTGAT CCAGAAGATG GCAAAAGTGG GTGTGAAAAA CCCACTCTTC
CTATTGGATG AGATCGATAA AATGGCATCG GATATGCGCG GAGATCCTGC TTCTGCACTA
CTGGAGGTGC TGGATCCAGA ACAAAACGTT GCATTTAACG ATCACTACCT GGAAGTGGAT
TACGATCTCT CGGATGTGAT GTTTGTGGCG ACCTCTAACT CCATGAATAT TCCCGCCCCG
TTGCTGGATC GTATGGAAGT TATTCGTCTG TCCGGCTATA CCGAAGATGA GAAACTCAAT
ATTGCTAAAC AGCATTTGCT GCCAAAACAA TTTGAACGCA ATGCCATCAA GAAAGGTGAG
TTGACCATTG ATGACAGCGC CATTATGAGC ATTATCCGTT ACTACACCCG TGAAGCTGGG
GTGCGTAGTT TGGAACGTGA AATTTCTAAA CTGTGTCGTA AGGCGGTAAA AAATCTGCTG
ATGGACAAAA CGGTTAAGCA CATTGAAATC AACGGGGATA ACCTAAAAGA TTTCCTTGGC
GTTCAGAAGG TTGACTACGG TCGTGCCGAT ACTGAAAACC GCGTAGGTCA GGTAACGGGT
CTGGCATGGA CTGAAGTGGG TGGTGACTTA CTTACTATCG AGACCGCTTG TGTTCCAGGT
AAAGGTAAGT TGACTTATAC CGGCTCACTG GGTGAAGTGA TGCAGGAGTC GATTCAGGCG
GCTCTAACCG TGGTACGCGC GCGCGCGGAT AAATTGGGTA TCAACCCTGA TTTCTATGAA
AAACGCGACA TCCACGTGCA TGTGCCGGAA GGGGCGACAC CTAAAGATGG CCCGAGCGCT
GGTATTGCAA TGTGCACAGC ACTGGTTTCT TGTCTGACGG GTAACCCCGT TCGTGCTGAT
GTTGCAATGA CGGGTGAGAT AACCTTACGT GGCTTAGTAT TGCCGATTGG CGGTTTGAAA
GAGAAATTAC TGGCCGCTCA CCGTGGTGGG ATCAAAGTGG TGTTGATTCC AGATGATAAC
AAACGTGATC TGGAAGAGAT TCCTGACAAT GTTATAGCTG ATCTGGAGAT CCACCCGGTT
AAACGAATTG ACGATGTTTT AGCCATTGCG TTGGAACACC CGGCCTTTGG TGCCCAGCCA
GTAGCGCCAA AATAG
 
Protein sequence
MNPERSERIE IPVLPLRDVV VYPHMVIPLF VGREKSIRCL EAAMDHDKRI MLVAQKEAST 
DEPGINDLFS VGTVASILQM LKLPDGTVKV LVEGLQRARI TTLSDSGEHF AAQAEYLESP
VMDDREQEVL VRTAINQFEG YIKLNKKIPP EVLASLHSID DAARLADTIA AHMPLKLNDK
QAVLEMFDIT ERLEYLMAMM ESEIDLLQVE KRIRNRVKKQ MEKSQREYYL NEQMKAIQKE
LGEMDDTPDE HEALKRKIEA AKMPKDAREK TEAELQKLKM MSPMSAEATV VRGYIDWMLQ
VPWNSRSKVK KDLVKAQEVL DTDHYGLERV KDRILEYLAV QSRVSKIKGP ILCLVGPPGV
GKTSLGQSIA KATGRQYVRM ALGGVRDEAE IRGHRRTYIG SMPGKLIQKM AKVGVKNPLF
LLDEIDKMAS DMRGDPASAL LEVLDPEQNV AFNDHYLEVD YDLSDVMFVA TSNSMNIPAP
LLDRMEVIRL SGYTEDEKLN IAKQHLLPKQ FERNAIKKGE LTIDDSAIMS IIRYYTREAG
VRSLEREISK LCRKAVKNLL MDKTVKHIEI NGDNLKDFLG VQKVDYGRAD TENRVGQVTG
LAWTEVGGDL LTIETACVPG KGKLTYTGSL GEVMQESIQA ALTVVRARAD KLGINPDFYE
KRDIHVHVPE GATPKDGPSA GIAMCTALVS CLTGNPVRAD VAMTGEITLR GLVLPIGGLK
EKLLAAHRGG IKVVLIPDDN KRDLEEIPDN VIADLEIHPV KRIDDVLAIA LEHPAFGAQP
VAPK