Gene YpsIP31758_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3088 
Symbol 
ID5388327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3476160 
End bp3478046 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content45% 
IMG OID640866095 
Productpeptidyl-prolyl cis-trans isomerase (rotamase D) 
Protein accessionYP_001402048 
Protein GI153948580 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.03508e-15 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGACA ATTTACGCGC GGCTGCTAAT AACGTCGTGC TCAAAATCAT TCTGGCCCTG 
ATCATGTTGT CCTTTATCCT GACTGGGGTT GGCAGCTATT TGATTGGTGG CTCCAACGAT
TACGCAGCCA AAGTTAATGA CCAAGACATT AGCCGGGCTC AGTTAGAACA GGCTATGCAA
AGTGAACGTG GTCGCCTGCA ACAAAAATTA GGTGAACAGT TCTCTGTGCT GGCCGCGAAT
GAAGGCTATA TGCAACAGTT GCGTCAGCAG GTGCTGGGGC AATTGATCAA CAATGTGTTA
CTTGACCAAT ATGCTAGAAA ATTGGGTCTG ACTGTCAGTG ATGAACAAGT AAAAGAGTCT
ATCCGCCAGA TACCTGATTT CCAAACAGGT GAACATTTCG ACAATAACCG ATATCTCGCA
CTGATTAACC AACTGGGCTA CACCCCAGAG CAATTTGCTC AATTACAGCG TCAGCAGTTG
ATCAACCAGC AATTGCTGAA AGCCTTTAGT GATACCGGTT TTGTGCTGCC TATTGAAGTG
CAGGCAATGT CAGCGTTGGT TTTACAACAA CGTGATGTCC GCTTGGCTAC TTTGGACCTC
AAAGCACTTC AAGCAGAGCA GAAAGTTACT GATGAAGAGC TACAAGCTTA TTACGATCAG
AACAAACATA ATTTCATTGC ACCGGAACAG ATGAAAGTCA GTTTTATTGC AATGGATGCA
GCGGCAATGC AGAGCAATAT CACGGTGACT GAAGAGGATA TTGCAGCGTA TTACGATCAA
AACCGCAGCA GTTACACCCA ACCTGAACGC CGTAATTACA GCGTCATTCA GTTTAAAACA
GAAGCCGAAG CTAAAGCGGC GCTTGATGAG CTGAAAAAAG GTGCTGATTT TGCTGTGATA
GCTAAAGAAA AATCCACCGA TATTATTTCT CGTAATAATG GTGGCGAACT TGGTTGGCTG
GAGCCAGAAA CAACACCTGA TGAGGTGAAA GCTGCCAATC TGAGCGAGAA AGGCCAACTG
TCTGATGTGA TCAAATCTTC TGTCGGTTAT TTAATTGTTC GCTTAAATGA TATCAAACCA
GAATTAGTTA AACCGCTATC AGAAGTGCAT GATGAGTTGG CTAAAAAGCT TAAGCAGGAA
AAAGCGCTTG ACGCTTATTA TGCGCTACAG CAAAAAGTCA ATGATGCGGC AACTAGCGAT
AACGAATCTC TGGCTTCAGC CGAAGAGGTC GCGGGGACTA AAGCTCAACA AACAGGTTGG
TTCACCCGTG ACACGGTACC GGCTGAAATT AATTTCAAAC CGGTAGTCCA GGCAATCTTT
GATGGTCGCC TGGTGGGTGA GAACGGTTCT GCGGGGAGTA ACTCTGAGGT TATTACCGTG
GATGGTGATC GTGCTTTTGT CATCCGTATT GATGGTCACA AGCCTGAAGG TATTGAGCCA
TTCGATCAGG TTCGCGATCA AATTAGTGAG CTGGTGAAAC GCCAAAAAGC GGAACAACAG
GCGCGTGTCG ATGGTGAAAA GATTCTAACC GCGTTGAAAC AAGGTAAAGG CGAAGAAGCG
ATGAAGTCCG CGGGTATCAG CTTCGGGGAA AAGAAAACGC TGTCATATGC ATCGGTTGAT
GATCAACTTA TGCAGACAAT CTTCGCTCTG GCGCATCCAC AGAAAGACCA GCCGGTTTAT
GGTTTATCTC AGGACCGTCA AGGCAACATC GTATTGATCG AGCTGTTATC GGTGACTCCG
GGTAAATTGC AGGAAAGTGA AACGAAGATC TTTATTGAGA AGATGCAGGA AGAGTCCGTT
AGCATGATAT TTGATGCGTT GATGGCTAAT CTGCATAAGC AGGCAACCAT TAAAATAGGC
CCTGCAGAGC AACAACAACC GCAATAA
 
Protein sequence
MMDNLRAAAN NVVLKIILAL IMLSFILTGV GSYLIGGSND YAAKVNDQDI SRAQLEQAMQ 
SERGRLQQKL GEQFSVLAAN EGYMQQLRQQ VLGQLINNVL LDQYARKLGL TVSDEQVKES
IRQIPDFQTG EHFDNNRYLA LINQLGYTPE QFAQLQRQQL INQQLLKAFS DTGFVLPIEV
QAMSALVLQQ RDVRLATLDL KALQAEQKVT DEELQAYYDQ NKHNFIAPEQ MKVSFIAMDA
AAMQSNITVT EEDIAAYYDQ NRSSYTQPER RNYSVIQFKT EAEAKAALDE LKKGADFAVI
AKEKSTDIIS RNNGGELGWL EPETTPDEVK AANLSEKGQL SDVIKSSVGY LIVRLNDIKP
ELVKPLSEVH DELAKKLKQE KALDAYYALQ QKVNDAATSD NESLASAEEV AGTKAQQTGW
FTRDTVPAEI NFKPVVQAIF DGRLVGENGS AGSNSEVITV DGDRAFVIRI DGHKPEGIEP
FDQVRDQISE LVKRQKAEQQ ARVDGEKILT ALKQGKGEEA MKSAGISFGE KKTLSYASVD
DQLMQTIFAL AHPQKDQPVY GLSQDRQGNI VLIELLSVTP GKLQESETKI FIEKMQEESV
SMIFDALMAN LHKQATIKIG PAEQQQPQ