| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3084 |
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| Symbol | |
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| ID | 5384583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3472029 |
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| End bp | 3473732 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866091 |
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| Product | putative ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001402044 |
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| Protein GI | 153950496 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0617058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTA TTCACCGGCT TACCCAATAT GAGCGTTTAT ATCAAAAATT TGGTGACCAC
CCGGTGGCGA CTACCGTGGC TGACGTGGCT AGTTTACTCT TTTGTAGCGA ACGGCATGCC
CGCACCCTGA TTCAGCAACT ACAGATGAAG AGTTGGCTAA GCTGGCATTC ACAAGTGGGT
AGAGGGAAAC GAGCGCAACT GCAATGCCTG AAAAAACCTG ATGCATTACG GGCTATTTAC
CTGCAACAGT TCCTTGAGCA AGGCGATCAT CAGGCGGCAT TCTCAATAGC ACAATTGGAA
CCCGAGCGCC TACAGACCTT ACTTACCCCC CATATGGGCG GACAATGGCA AGCCGATAGC
CCTATTCTGC GTATCCCCTA CTACCGCGAG CTGGAACCGC TTAATCCCAT GAATGCTACA
GGGCGGGCAG AACAGCACCT GATTTATACT TTGCATGCTG GGCTGACACG GTTTAATACA
GGTGACCCGT TGCCTAAACC TGATTTGGCT CATCACTGGC AAATCAGCGC AGATGGCTTA
ACCTGGCAGT TCTTCTTACG CAGCCAACTA CGTTGGCATA ATGGCGACCA CATTCATGGT
AAGCAATTAT TGCAAACACT GGAGATTCTG CGCGCAAACC GACGTAGCCA ACCCAGTTTT
GCTAATATTG TTACTATCAC TCTCCCCCAC GCTTTATGCC TACAATTTAC CCTTTCCCAA
CCAGATTATT GGCTAGCACA CCGGCTGGCT GATTTACCCT GTAGGTTTTT TCATCCAGAC
GATCCCTTTT TAGGTGCGGG TCCTTTTAAA TTAGCGACCT TTGATAAACA TTTAGTTCGG
CTAAAGCAGC ACGAATTTTA CCATTTGCAA CATCCCTATC TGGACATTAT CGAGTACTGG
ATCACCCCTA GCCTGACGGT AAATTCAACA AATGGCAGTT GCCAGCATCC GGTTCGCATC
ACCATCGGCC AAGAGGAAGA GTTCCCACTG GCCCGCCCCG TACAGCGCAG CATGAGCCTC
GGATTCTGCT ACCTGGCTAT TAATCGCCAT CGTAGCAACC TCACTCCACA GCAAATAGCC
AAGCTACTGA TGTTAGTCCA AACCTCGGGT ATATTAGAGG CGCTTTCCAT CAGCCGTGAC
GTAATAACGC CCTGCCATGA AATCCTTCCA GGCTGGCCTA TTCCACAGTT TTCGACGGAT
GAAAATCCCT CCCTTCCCGC CTGTTTGGTT CTGACCTATC AACCGCCGAT GGAGCTTGAG
AGTGTCGCTG AGCAACTAAA AATAGTATTA GCCGCTCATG GCTGTACATT AGAGATCCGC
GCCTGCCATG ATAAACAGTG GCAAGATGTT GACAAAATTA AAGAGAGCGA TTTACTGTTG
GCCGATCATT TAGTCGGTGA ATCGCCAGAG GCCACAATGG AGAGCTGGCT ACGGCTGGAC
CCTCTGTGGC GCGGAATTTT ACAGAACGAA CAGTGGAACC AGCAGCAAAA AACGCTGACC
TTCATTCAGC AGATAGAAAG CGCGCCAGAA CGTTTTCGCC AATTACAGGC ACATTACGAT
GACCTGATGT TAGCGGGACT GATTTTGCCG CTGTTTAACT ATGAATATCA GGTCAATGCC
CCATCACGCA TCAATGGGGT TACATTAACG GCATATGGTT GGTTCGATTT CTGTCAAGCC
TGGCTACCGC CAATAACGAA TTAA
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| Protein sequence | MRIIHRLTQY ERLYQKFGDH PVATTVADVA SLLFCSERHA RTLIQQLQMK SWLSWHSQVG
RGKRAQLQCL KKPDALRAIY LQQFLEQGDH QAAFSIAQLE PERLQTLLTP HMGGQWQADS
PILRIPYYRE LEPLNPMNAT GRAEQHLIYT LHAGLTRFNT GDPLPKPDLA HHWQISADGL
TWQFFLRSQL RWHNGDHIHG KQLLQTLEIL RANRRSQPSF ANIVTITLPH ALCLQFTLSQ
PDYWLAHRLA DLPCRFFHPD DPFLGAGPFK LATFDKHLVR LKQHEFYHLQ HPYLDIIEYW
ITPSLTVNST NGSCQHPVRI TIGQEEEFPL ARPVQRSMSL GFCYLAINRH RSNLTPQQIA
KLLMLVQTSG ILEALSISRD VITPCHEILP GWPIPQFSTD ENPSLPACLV LTYQPPMELE
SVAEQLKIVL AAHGCTLEIR ACHDKQWQDV DKIKESDLLL ADHLVGESPE ATMESWLRLD
PLWRGILQNE QWNQQQKTLT FIQQIESAPE RFRQLQAHYD DLMLAGLILP LFNYEYQVNA
PSRINGVTLT AYGWFDFCQA WLPPITN
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