| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3076 |
|---|
| Symbol | tesB |
|---|
| ID | 5384375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3462358 |
|---|
| End bp | 3463218 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640866083 |
|---|
| Product | acyl-CoA thioesterase II |
|---|
| Protein accession | YP_001402036 |
|---|
| Protein GI | 153948770 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1946] Acyl-CoA thioesterase |
|---|
| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.00416001 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGG CATTAGAAAA ACTGCTCGAT CTGCTCGATC TAGAGAAAAT TGAAGAAGGC
ATTTTCCGTG GACAAAGCGA AGATCTAGGT TTGCGGCAGG TATTTGGTGG TCAGGTTGTT
GGTCAGGCGA TTTATGCTGC GAAACAAACC GTCCCCGCAG AACGGACTGT TCACTCATTT
CATAGCTATT TTCTGCGCCC TGGAGACAGC AGTAAACCCA TTATTTATGA CGTAGAAACA
CTGCGTGATG GCAACAGTTT CAGCGCCCGC CGGGTCAGTG CGATTCAAAA TGGTAAGCCT
ATCTTTTATA TGACGGCCTC GTTCCAGAGT CAGGAAGAAG GGTTTGAGCA CCAAAATACA
ATGCCAGACG TCCCACCACC AGAAGGGTTA ATGTCCGAAA CGGATATTGC CCGCCAGTTT
TCACACTTGA TCCCCGAGAA AGTGCGAGAA AAGTTTATTG GCCCACAACC CATTGAAATG
CGTCCGGTAA AATTCCACAA CCCGCTGCAA GGCAGTGTAG AAGAACCCAA TCGCTATGTT
TGGTTCCGCG CTAATGGCAA AATGCCAGAT GACCTACGGG TTCATCAATA TTTACTGGGT
TATGCCTCGG ACTTTAATTT CCTGCCCACG GCTTTACAAC CGCACGGCAT TGGTTTCCTT
GAACCCGGTA TGCAAATCGC CACTATCGAC CACTCGATGT GGTTCCATCG GCCATTCCGT
TTGGATGACT GGTTACTCTA TGCCGTAGAA AGTACTTCTG CGTCAGGTGC CCGTGGCTTC
GTTCGAGGGC AAATCTATAA CCGGGAAGGG ATGCTGGTAG CTTCTACTGT GCAGGAGGGT
GTGATTCGTT TACATCGTTG A
|
|---|
| Protein sequence | MSQALEKLLD LLDLEKIEEG IFRGQSEDLG LRQVFGGQVV GQAIYAAKQT VPAERTVHSF
HSYFLRPGDS SKPIIYDVET LRDGNSFSAR RVSAIQNGKP IFYMTASFQS QEEGFEHQNT
MPDVPPPEGL MSETDIARQF SHLIPEKVRE KFIGPQPIEM RPVKFHNPLQ GSVEEPNRYV
WFRANGKMPD DLRVHQYLLG YASDFNFLPT ALQPHGIGFL EPGMQIATID HSMWFHRPFR
LDDWLLYAVE STSASGARGF VRGQIYNREG MLVASTVQEG VIRLHR
|
|---|
| |