Gene YpsIP31758_3067 details

Gene Information

• Locus tag: YpsIP31758_3067
• Symbol: acrA
• ID: 5384411
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 3453182
• End bp: 3454369
• Gene Length: 1188 bp
• Protein Length: 395 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640866073
• Product: acriflavine resistance protein A
• Protein accession: YP_001402027
• Protein GI: 153950661
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0845] Membrane-fusion protein
• TIGRFAM ID: [TIGR01730] RND family efflux transporter, MFP subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.018659
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAAA ACAGAGGGGT AATGCCTCTG GCTGCAATTC TGGTACTTTC AGGCAGCTTA 
GTACTTATAG GATGTAATGA CAAAGATGCG GCGCAAGCCG GTGCTCAACA AGCTCCTGAG 
GTTGGTGTTG TGACATTGAA AGCAGAACCG CTGAATATCA CAACCGATTT GCCAGGCCGC 
ACGTCCGCCT TCCGTGTTGC AGAAGTTCGC CCGCAGGTAA GCGGGATTAT TCTCAAACGT 
AATTATATTG AAGGCAGTGA TGTCACCGCC GGAACATCCC TTTATCAAAT TGACCCTGCG 
ACTTATCAGG CCGCTTATGA CAGTGCAAAA GGTGATCTGG CTAAAGCACA GGCTTCAGCA 
CAAATTGCTC ATTTAACCGT CAATCGCTAC AAGCCATTGT TGGGTACTAA CTACATCAGT 
AAACAAGAAT ATGATCAGGC CCTATCAGAT GCCCAACAAG CAGATGCCAC CGTGTTAGCA 
GCAAAAGCGG CACTGGAGTC TGCACGCATT AATCTGGCGT ATACCCAAGT GAGATCACCA 
ATCAGCGGCC GTACCGGTAA ATCTGCCGTG ACGGAAGGTG CATTGGTTAC CAGTGGTCAG 
GCGTCAGCAA TGACTACCGT TCAACAGCTT GATCCAATGT ATGTCGATGT CACTCAATCG 
AGTGATGAGT TCCTACGGCT GAAAAAAGAG CTGGCTGATG GCATTCTCAA GCAAGAAAAC 
GGCAAAGCTA AAGTCCGTTT GTTGCTGGAA AACGGGGTTG AATATACAGA AACCGGTACT 
TTGGAGTTCT CCGGTGTCAC TGTTGATGAA ACTACCGGTT CGATTACTCT CCGTGCGATC 
TTCCCTAATC CAAATGAGGC GCTGTTGCCA GGCATGTTTG TCCGTGCCCG TTTGGATGAA 
GGTATCCGTC CTGATGCGCT GTTAGTTCCG CAACAAGGCG TGACTCGCAA CCCACGTGGT 
GAAGCAACAG CCATGGTCGT CGGCGCGGGT AATAAAGTTG AAATGCGTAC CCTGATAGCG 
AACCAAGCAA TCGGTAATAA ATGGCTGGTC ACTGAAGGGC TAAAAGCCGG TGATCGCCTG 
ATTATTTCCG GCTTGCAGAA AATCAAACCA GGTGTAGAGG TAAAAGTGCA GGAAGTTACT 
GACACTGCAC CAGAAACAGC CCCGGCTGAT ACAGCGAAGA AGTCTTAA 

 

Protein sequence

MSKNRGVMPL AAILVLSGSL VLIGCNDKDA AQAGAQQAPE VGVVTLKAEP LNITTDLPGR 
TSAFRVAEVR PQVSGIILKR NYIEGSDVTA GTSLYQIDPA TYQAAYDSAK GDLAKAQASA 
QIAHLTVNRY KPLLGTNYIS KQEYDQALSD AQQADATVLA AKAALESARI NLAYTQVRSP 
ISGRTGKSAV TEGALVTSGQ ASAMTTVQQL DPMYVDVTQS SDEFLRLKKE LADGILKQEN 
GKAKVRLLLE NGVEYTETGT LEFSGVTVDE TTGSITLRAI FPNPNEALLP GMFVRARLDE 
GIRPDALLVP QQGVTRNPRG EATAMVVGAG NKVEMRTLIA NQAIGNKWLV TEGLKAGDRL 
IISGLQKIKP GVEVKVQEVT DTAPETAPAD TAKKS