Gene YpsIP31758_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3052 
SymbolddhD 
ID5386400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp3436571 
End bp3437560 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content37% 
IMG OID640866058 
ProductCDP-6-deoxy-delta-3,4-glucoseen reductase 
Protein accessionYP_001402012 
Protein GI153950337 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTAA ATGTTAAGCT GCATCCATCA GGTATTATTT TTACTTCCGA TGGAACATCT 
ACAATATTAG ATGCGGCTCT GGATAGTAAT ATACATATTG AATATAGCTG CAAAGATGGA 
ACCTGTGGTT CTTGTAAGGC AATATTGATT TCTGGTGAAG TAGACAGTGC GGAAAATACC 
TTTTTAACTG AGGAAGATGT TGCTAAAGGT GCAATCCTCA CTTGTTGCTC TAAGGCTAAA 
TCTGATATTG AGTTAGATGT TAATTATTAT CCAGAGTTAA GTCATATACA AAAAAAAACT 
TACCCATGTA AATTAGATAG CATTGAATTT GTTGGTGAAG ATATTGCCAT TCTCTCCTTA 
CGTTTGCCAC CAACGGCCAA AATACAGTAT CTAGCGGGCC AATACATTGA TTTAATTATT 
AATGGACAGC GTCGTAGTTA CTCTATTGCT AATGCTCCAG GTGGTAATGG CAATATCGAA 
TTACACGTAC GTAAAGTCGT TAATGGTGTA TTCAGCAACA TCATTTTTAA TGAGTTAAAA 
TTACAGCAAC TTTTACGAAT TGAAGGTCCT CAAGGGACCT TTTTCGTTCG TGAAGATAAT 
CTCCCTATTG TTTTTCTTGC TGGTGGAACA GGTTTTGCAC CAGTGAAATC AATGGTTGAG 
GCGTTGATCA ATAAAAATGA CCAACGGCAG GTTCATATCT ATTGGGGAAT GCCAGCAGGG 
CATAATTTCT ATTCTGACAT TGCCAATGAG TGGGCTATAA AACACCCTAA CATTCATTAT 
GTGCCTGTTG TATCAGGCGA TGATAGTACT TGGACCGGAG CCACTGGTTT TGTACATCAA 
GCGGTGCTTG AAGATATACC CGATCTCAGC TTATTTAATG TTTATGCCTG TGGTTCATTA 
GCGATGATTA CTGCTGCTCG TAATGATTTC ATCAATCATG GATTAGCTGA AAATAAATTT 
TTCTCTGATG CCTTTGTGCC ATCAAAATAA
 
Protein sequence
MSLNVKLHPS GIIFTSDGTS TILDAALDSN IHIEYSCKDG TCGSCKAILI SGEVDSAENT 
FLTEEDVAKG AILTCCSKAK SDIELDVNYY PELSHIQKKT YPCKLDSIEF VGEDIAILSL 
RLPPTAKIQY LAGQYIDLII NGQRRSYSIA NAPGGNGNIE LHVRKVVNGV FSNIIFNELK 
LQQLLRIEGP QGTFFVREDN LPIVFLAGGT GFAPVKSMVE ALINKNDQRQ VHIYWGMPAG 
HNFYSDIANE WAIKHPNIHY VPVVSGDDST WTGATGFVHQ AVLEDIPDLS LFNVYACGSL 
AMITAARNDF INHGLAENKF FSDAFVPSK