Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3051 |
Symbol | ddhA |
ID | 5388447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3435760 |
End bp | 3436533 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640866057 |
Product | glucose-1-phosphate cytidylyltransferase |
Protein accession | YP_001402011 |
Protein GI | 153950020 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGCAG TCATTTTGGC CGGAGGCCTT GGAACCCGTC TTAGTGAAGA GACCGTAGTA AAACCAAAAC CAATGGTAGA GATTGGTGGG AAGCCTATTC TCTGGCATAT TATGAAACTT TACTCTTCTT ATGGCATCAA TGATTTCGTT ATTTGCTGTG GTTATAAAGG CTATGTCATT AAAGAATATT TTGCGAATTA CTTTATGCAC ATGTCGGATA TTACCTTCTG CATGCGTGAT AATGAAATGA TAGTACACCA AAAGCGAGTC GAACCCTGGA ATGTCACGTT AGTAGACACC GGCGAAGATT CTATGACCGG TGGCCGACTG AGGCGTGTAA AAGATTACGT CAAAGACGAT GAGGCTTTCT GTTTCACCTA TGGTGATGGT GTGAGTGACG TCAATATTGC TGAATTAATT GAATTCCATA AGAGCCACGG CAAGCAAGCT ACATTAACGG CAACCTATCC CCCAGGCCGT TTTGGTGCGC TGGATATTAA AGATAAACAA GTACGTAGTT TTAAAGAAAA ACCAAAAGGC GATGGCGCAT TGATCAACGG CGGTTATTTT GTTTTGTCGC CTAAAGTTAT CGATCTGATC GATGGTGATA AGTCTACTTG GGAGCAGGAA CCTTTAATGA CATTAGCTGC GCAGGGGGAG TTGATGGCGT TTGAACATGC CGGGTTCTGG CAGCCAATGG ATACGTTGCG TGACAAGATC TATCTGCATG AACTATGGGA AGAAGGCAGG GCACCTTGGA AGGTATGGGA ATAA
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Protein sequence | MKAVILAGGL GTRLSEETVV KPKPMVEIGG KPILWHIMKL YSSYGINDFV ICCGYKGYVI KEYFANYFMH MSDITFCMRD NEMIVHQKRV EPWNVTLVDT GEDSMTGGRL RRVKDYVKDD EAFCFTYGDG VSDVNIAELI EFHKSHGKQA TLTATYPPGR FGALDIKDKQ VRSFKEKPKG DGALINGGYF VLSPKVIDLI DGDKSTWEQE PLMTLAAQGE LMAFEHAGFW QPMDTLRDKI YLHELWEEGR APWKVWE
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