Gene YpsIP31758_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3042 
Symbol 
ID5386726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3424844 
End bp3425857 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content36% 
IMG OID640866048 
Productglycosyl transferase WbyK, group 1 family protein 
Protein accessionYP_001402002 
Protein GI153947840 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA TTTATGATGG AATAATTAAT TCATTGCAAA ATATGGGAGG GGTAACTGTC 
TATTTCTCGG AGTTAGTGAG TCGACTTCCT GCAACAGATT TTTATTGGTA CTCATACGCA
GATGAAATAT CTGGTTTCGG TGTTGGTAAT GTTAAAATAA AATCTAGACT TTTAGAGCGA
TATAGGAATT TCTCATTAGA TACTATTAAT TATAATTCTC TTTCTGTATT TCATTCATCA
TATTACCGAT TACCAGATTT TGACATTCCG ATAGTTACAA CAGTTCATGA TTTCACATAT
GAAAAGTTTG TTAATGGCCC TGCAAAATGG GTGCATTCCT GGCAGAAAAA CCGTGCGGTT
AACAATAGTG ATTTAATTAT TTGTGTTTCG GAAAATACAG CTAAAGATTT GCAAATGTAT
TGCTCAGTTC CTAGCAATAA AATCAGAGTG ATATATAACG GTGTGTCAGA TAAATATCAT
TATATTAAGG GTGTTAAAAT AACCACAAAT AAAGTTATTT TTGTTGGTGC GCGTGGTGGT
TATAAGAATT TTGACATTGC AGTGAAAGCA ATATCAAAAA CACCTCACCT CGAATTATCA
GTTGTAGGTG GAGGGGCATT CACTAGTAAA GAACTGTCAC TACTGAATCA CTATTTACCT
GGGCGCTACC ATGGATTAGG ACGTCTGAGT GACGAGGCCT TGAATGAGGC ATATAATTCA
GCTTATGCGC TGCTTTACCC ATCTAGCTAT GAAGGTTTTG GTATTCCAAT ATTAGAAGCG
ATGAGTGCAG GATGTCCCGT AATATCTGTT AATGTATCTT CTATACCTGA GGTCGCAGGT
GATGCCGCTA TATTAGTGCA AAAACCGACT GTTGATGAAC TAGTTGACGG CTTGCTTGCC
GTAGAAAGTG AAAGGTCTAA ACTTATTGGC TATGGCATGA AGCAAGCGGC TAAGTTCTCA
TGGGATAAGT GTTATCAAGA AACCTTAGAT GTTTATAAAG AATTGAACAA ATAA
 
Protein sequence
MKIIYDGIIN SLQNMGGVTV YFSELVSRLP ATDFYWYSYA DEISGFGVGN VKIKSRLLER 
YRNFSLDTIN YNSLSVFHSS YYRLPDFDIP IVTTVHDFTY EKFVNGPAKW VHSWQKNRAV
NNSDLIICVS ENTAKDLQMY CSVPSNKIRV IYNGVSDKYH YIKGVKITTN KVIFVGARGG
YKNFDIAVKA ISKTPHLELS VVGGGAFTSK ELSLLNHYLP GRYHGLGRLS DEALNEAYNS
AYALLYPSSY EGFGIPILEA MSAGCPVISV NVSSIPEVAG DAAILVQKPT VDELVDGLLA
VESERSKLIG YGMKQAAKFS WDKCYQETLD VYKELNK