| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2971 |
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| Symbol | rbsC5 |
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| ID | 5388248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3342030 |
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| End bp | 3343058 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640865977 |
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| Product | ribose ABC transporter, permease protein |
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| Protein accession | YP_001401933 |
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| Protein GI | 153948364 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACAGC CGCTTTCCAA GCCCCAGGCA TCGGTAAAAA GCGCGATGCG TTTTGACCCG
ATCACTTTTT TTGAACGCTT CGGCGTCCTG ATTTTTATGT TCCTGCTGCT GATTTTCTTC
CAATTGCAGA ACAGTAATTT TCTCTCAGAA CGCAATATTT TCAACATCCT AACTGAGGTA
TCCATCTACG GCATCATGGC CGTGGGCATG ACCTTCGTCA TCCTGACCGC GGGTATTGAT
CTTTCCGTCG GCTCAATTCT TGCGGTGTCC GCCATGACAG CCGCTTATGT GATTAAAGGC
GATAACTTTA CCACCATTGA CCCCAACGCT TGGGGCGGCA TGAGTTGGCT AATTGGCCTC
AGTATTTGTC TGGCAATGGG CACCCTTATT GGTTTTTTGC AGGGCTTGGG GGTCACGCGT
CTGCGTCTGC CGCCCTTTAT TGTCACCCTG GGTGGGATGA CCATCTGGCG TGGCCTGACG
TTGGTGATTA ACGACGGTGC CCCTATCGCC GGGTTTGATG CAGGCTACCG CTGGTGGGGG
CGCGGGGACT TACTCGGTAT TTCAATACCC ATTTGGATTT TTGCCATTGT CGCGATAGCC
GGTTATCTGG CGCTGCACAA AACCCGCTGG GGGCGTTTCG TCTATGCGAT TGGCGGTAAT
CCTGAAGCGG CACGTTTGGC GGGAGTTAAC GTGAAACGCG TGCTGGTCAG CGTCTACGTG
GTGATCGGCT GCCTTGCCGG GTTGGCGGGT TTCATCCTAA GCGCCCGGCT GGGCAGTGCT
GAAGCGGTAG CCGGGATCTC GTTTGAATTG CGGGTGATTG CCTCGGTGGT GATTGGCGGC
ACTTCACTGA TGGGCGGCTA CGGGCGTATC GGCGGCACCA TTATTGGCTC CATCATCATG
GGGATCTTGA TTAACGGTTT GGTGCTGATG AATGTTTCGG CTTACTACCA GCAAATTATC
ACCGGCCTGA TCATCGTATT GGCGGTGGCC TTTGATACCT ACGCCAAGAA CCGTCGCGGC
GCGCTGTAA
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| Protein sequence | MLQPLSKPQA SVKSAMRFDP ITFFERFGVL IFMFLLLIFF QLQNSNFLSE RNIFNILTEV
SIYGIMAVGM TFVILTAGID LSVGSILAVS AMTAAYVIKG DNFTTIDPNA WGGMSWLIGL
SICLAMGTLI GFLQGLGVTR LRLPPFIVTL GGMTIWRGLT LVINDGAPIA GFDAGYRWWG
RGDLLGISIP IWIFAIVAIA GYLALHKTRW GRFVYAIGGN PEAARLAGVN VKRVLVSVYV
VIGCLAGLAG FILSARLGSA EAVAGISFEL RVIASVVIGG TSLMGGYGRI GGTIIGSIIM
GILINGLVLM NVSAYYQQII TGLIIVLAVA FDTYAKNRRG AL
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