Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2954 |
Symbol | lipB |
ID | 5385166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3326381 |
End bp | 3327082 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865960 |
Product | lipoate-protein ligase B |
Protein accession | YP_001401916 |
Protein GI | 153950843 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000000000757866 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCCTC GCTTGCAACA ACACAAGATC ATTTTACGTC AGCTAGGGTT ACAACCCTAT GCACCCGTAT CCCAAGCCAT GCATAACTTT ACTGAGTTTC GCACTGATAC CACACCAGAC GAAATCTGGT TGGTTGAGCA TCAGCACGTC TTTACTCAGG GTCAGGCTGG AAAAGCTGAA CATGTCCTGA TGCCAGGTGA TATTCCGGTT ATTCAAAGTG ATAGGGGTGG TCAGATCACC TACCATGGCC CCGGACAGCA AGTGATGTAT GTCATGGTCG ATCTCAAACG TGCCAAAATC GGTGTACGCC AGCTAGTCAC CGCCATTGAG AATACGGTGA TAGAGACTCT CGCCCATTTC AATATTGATT CACATGCTCG CCCAGATGCC CCCGGTGTCT ATGTTGAACA ACAGAAAATA TGCTCACTGG GGCTACGCAT CCGCCGAGGC TGTTCGTTTC ACGGTTTAGC ATTGAACATT GCGATGGATC TGGAACCATT CCAGCGCATT AATCCGTGCG GCTACGCGGG TATGCAGATG ACACAAGTCA GTGCATTACA ACCAGGGGTT ACCGTTGCGG ATGTGCAGCC TGTATTGGTT CGCGAATTTA CCCGCCAATT AGGTTATCCG ACGGCAAAAT TGCAGCCGTG GTCATTATCA GACTATTTAT TATCAAGCCA TTCATCATCA AGCGTGTTGT AA
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Protein sequence | MMPRLQQHKI ILRQLGLQPY APVSQAMHNF TEFRTDTTPD EIWLVEHQHV FTQGQAGKAE HVLMPGDIPV IQSDRGGQIT YHGPGQQVMY VMVDLKRAKI GVRQLVTAIE NTVIETLAHF NIDSHARPDA PGVYVEQQKI CSLGLRIRRG CSFHGLALNI AMDLEPFQRI NPCGYAGMQM TQVSALQPGV TVADVQPVLV REFTRQLGYP TAKLQPWSLS DYLLSSHSSS SVL
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