Gene YpsIP31758_2949 details

Gene Information

• Locus tag: YpsIP31758_2949
• Symbol: mrdA
• ID: 5385018
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 3319791
• End bp: 3321686
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640865955
• Product: penicillin-binding protein 2
• Protein accession: YP_001401911
• Protein GI: 153950877
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.151032
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG AACCTAACCC TTTTCGCGAC TATTCGGCTG AATCAGCCCT GTTTGTCCGC 
CGCGCCGTAG TGGCTTTTCT GGGTATCCTG CTACTGAGCG GGGTACTGGT TGCTAACCTC 
TATAATTTGC AAATAGTCCG TTTCGACGAT TACAGCACCC GCTCCAACGA CAACCGCATC 
AAACTGGTTC CTATCGCCCC TAGCCGTGGC ATGATATTTG ACAGAAATGG CACACCACTG 
GCATTAAACC GCACCATCTA TCAATTAGAG TTGATGCCGG AAAAGATCGA AAACTTGTCA 
GCCACCCTCA ATGCGCTGCG CCCAATAGTG GATCTGACTG ACGACGATAT CGCTAACTTT 
GAAAAAGAGC GCAAACGCTC ACGTCGCTTT ACCTCTATTG CCGTTAAAAC ACCGTTGACC 
GAGGTGCAAG TCGCCCGTTT TGCAGTGAAT CAATTCCGCT TCCCCGGAAT TGAAGTCAAA 
GGCTATCAAC GTCGCTTCTA CCCGCATGGC TCCGCCCTGA CCCACGTGAT TGGCTATGTC 
TCTAAAATTA ACGATAAAGA TGTCGAACGG TTGGATAAAG AAGGCATTCT CCCCAATTAT 
GCTGCGACCC ACGATATCGG TAAGTTGGGT ATTGAACGCT ATTATGAATC CACCTTACAT 
GGCAAAACTG GTTATGAAGA AGTTGAAGTC AATAACCGAG GCCGGGTAAT CCGCCAATTA 
CATGAGCAAC CGCCACAAGC AGGTAAAGAT ATTTATCTGA CTCTCGATCT GAGTCTACAA 
ATCTATATCG AGAAGTTACT CACTGGCAGC CGTGCTGCGG TCGTCGTCAC AGACCCACGC 
ACCGGCGGGA TCCTGGCCTT GGTATCAAAC CCAAGCTATG ACCCGAACCT GTTTGTCGAC 
GGCATCTCCA ACAAAGATTA TCAAGGGTTG CTTAACGATA CGAACCGCCC CTTAATCAAT 
CGGGCAACCC AAGGCGTTTA TCCACCGGCA TCAACCGTGA AACCGTACAT CGCAGTGTCA 
GCACTGAGTG CCGGGGTTAT CACCAAAAAC ACCAGCCTGT TCGATCCTGG TTGGTGGCAA 
CTGCCCGGTT CGGAAAAGCG CTACCGTGAC TGGAAAAAAT GGGGCCATGG CCGCCTGAAC 
GTCACCAAAG CACTGGAAGA ATCGGCAGAT ACCTTCTTCT ACCAAGTCGC CTATGATATG 
GGCATTGATC GCTTATCATC TTGGATGAGC AAATTCGGGT ACGGTGAATA TACTGGCATT 
GATTTATCCG AAGAGCGTGC GGGTTTAATG CCAACACGCG AGTGGAAGCA AAAGCGCCAT 
AAAAAGCCTT GGTATCAGGG TGATACCATT CCGGTAGGTA TTGGCCAGGG TTATTGGACT 
GCGACGCCAA TCCAGATGGC TAAAGCCTTA ATGACCCTGA TTAATGATGG CACAGTCAAG 
ACACCTCACC TGTTGCAAAG CACCCGGATT GATGGCGTCT TAGTGCCTTA TAAGCAGGAA 
GACAGTACGC AGATTGGGAG TATCAATTCT GGCTATTGGG AAATTGCTAA AGACGGCATG 
TATGGCGTAG CGAACCGCCC GAACGGTACT GGCCGCAAGT TTTTTGAAGG TACACCTTAT 
AAAGCAGCGG CGAAATCGGG TACCGCACAG GTTTACAGTT ATGAAACCTA TAATGCCAGT 
AAAGTGGCAG AACACCTGCG CGACCATAAG TTAATGGTTG CGTTTGCTCC CTATGAGAAC 
CCTACGGTAT CCGTTGCAAT AATCTTGGAA AATGGAGGCG CGGGGCCTGC GGTAGGGACC 
ATTACCCGTC AGATCCTCGA CCATATCTTG TTGGGCGATA ATAATACTGA ATTACCGGAT 
GCGATTCCTC TGCCTCCTGG CGTTGAAGCA GATTAG 

 

Protein sequence

MKKEPNPFRD YSAESALFVR RAVVAFLGIL LLSGVLVANL YNLQIVRFDD YSTRSNDNRI 
KLVPIAPSRG MIFDRNGTPL ALNRTIYQLE LMPEKIENLS ATLNALRPIV DLTDDDIANF 
EKERKRSRRF TSIAVKTPLT EVQVARFAVN QFRFPGIEVK GYQRRFYPHG SALTHVIGYV 
SKINDKDVER LDKEGILPNY AATHDIGKLG IERYYESTLH GKTGYEEVEV NNRGRVIRQL 
HEQPPQAGKD IYLTLDLSLQ IYIEKLLTGS RAAVVVTDPR TGGILALVSN PSYDPNLFVD 
GISNKDYQGL LNDTNRPLIN RATQGVYPPA STVKPYIAVS ALSAGVITKN TSLFDPGWWQ 
LPGSEKRYRD WKKWGHGRLN VTKALEESAD TFFYQVAYDM GIDRLSSWMS KFGYGEYTGI 
DLSEERAGLM PTREWKQKRH KKPWYQGDTI PVGIGQGYWT ATPIQMAKAL MTLINDGTVK 
TPHLLQSTRI DGVLVPYKQE DSTQIGSINS GYWEIAKDGM YGVANRPNGT GRKFFEGTPY 
KAAAKSGTAQ VYSYETYNAS KVAEHLRDHK LMVAFAPYEN PTVSVAIILE NGGAGPAVGT 
ITRQILDHIL LGDNNTELPD AIPLPPGVEA D