Gene YpsIP31758_2944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2944 
Symbol 
ID5385485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp3316570 
End bp3317088 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content53% 
IMG OID640865950 
Productpentapeptide repeat-containing protein 
Protein accessionYP_001401906 
Protein GI153948191 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.281269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGA CCGATTTAAA CAAAATTCTC GCCGAGCATA AAATATGGGT TGAGTCGTAC 
AGAGAAAACG GATCCAGAGC CGACCTGAGA AGTGCCAACC TGAGCGGTGC CGACCTGAGC 
GGTGCCGACC TGAGCGGTGC CGACCTGAGA AGTGCCAACC TGAGAAGTGC CAACCTGAGA 
AGTGCCGACC TGAGAAGTGC CAACCTGAGA AGTGCCGACC TGCGCGGTGC CAACCTGAGC 
GGTGCCGACC TGCGCGGTGC CAACCTGCCT GATCGCACTT ATGTGATTAT GGGTGAGAAG 
TATTATCTGC AAATTAGCAA CGGTGAGAAT GTTCGTGCTG GTTGCCAGAA CCACACAGCA 
GAAGAATGGC GCAAATTCAG TAAGCGCGAT ATTGCGAACA TGGACGGCAA GACGGCGATT 
AAGTTCTACC CTCGCCTGTT AGACATCATC GACTTCTATC TCGGTAAAGG TGAGCGTCCT 
GAGTGGATTA ATGAGCCAGA TGAAGAAGCA GCAGTCTAA
 
Protein sequence
MNLTDLNKIL AEHKIWVESY RENGSRADLR SANLSGADLS GADLSGADLR SANLRSANLR 
SADLRSANLR SADLRGANLS GADLRGANLP DRTYVIMGEK YYLQISNGEN VRAGCQNHTA 
EEWRKFSKRD IANMDGKTAI KFYPRLLDII DFYLGKGERP EWINEPDEEA AV