| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2876 |
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| Symbol | cydA |
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| ID | 5388540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3243661 |
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| End bp | 3245229 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640865876 |
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| Product | cytochrome d ubiquinol oxidase, subunit I |
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| Protein accession | YP_001401839 |
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| Protein GI | 153949488 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0645445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATA TTGTCGAACT GTCACGGTTA CAGTTTGCCT TAACGGCAAT GTACCATTTC
CTTTTTGTCC CATTAACGCT CGGTCTGGCG TTTCTGTTGG CAATTATGGA ATCGGTTTAT
GTGCTGTCTG GTAAACAAAT CTATAAAGAT ATGACCAAAT TCTGGGGTAA GTTATTTGCT
ATTAACTTTG CTCTGGGGGT TGCCACTGGT TTAACTATGG AGTTCCAGTT TGGGACTAAC
TGGTCATATT TCTCTCATTA CGTCGGTGAT ATCTTCGGGG CCCCTCTGGC TATCGAAGGT
TTAATGGCGT TCTTCCTGGA ATCTACGTTT GTCGGTCTAT TCTTCTTCGG ATGGGATCGT
CTGACTAAGC ATCAGCATTT AGCTGTAACT TGGCTAGTTG CGTTAGGTTC TAACTTCTCT
GCATTGTGGA TCTTGGTTGC GAATGGTTGG ATGCAAAACC CGATTGCATC TGATTTCAAC
TTTGAAACCA TGCGTATGGA AATGCTGAGC TTCTCAGAAT TAGTTCTGAA CCCGGTTGCT
CAGGTGAAAT TCGTTCATAC CGTCGCTGCA GGTTATGTTA CCGGCGCGAT GTTTATCTTA
GGTATCAGTT CTTACTATCT GTTGAAAGGA CGTGATATTC CCTTTGCCAA GCGTTCTTTT
GCGATTGCTG CAAGTTTTGG TCTGGCCTCC GTATTGTCTG TTATCGTCCT GGGTGATGAG
TCCGGTTACG AAATGGGTGA CGTACAGAAA ACCAAGTTAG CCGCAATTGA AGCTGAATGG
GAAACTCAGC CGCCTCCAGC AGCCTTTACG CTGTTTGCGA TCCCTAACCA GGAAACCATG
GAGAACCGGT TCGCCATTCA GATTCCATAT GCATTAGGAT TGATCGCGAC CCGTTCACTG
GATACCCCGG TTATCGGTTT GCGTGACTTG ATGTCGCAAC ATGAAGTGCG TATTCGTAAC
GGTATCCAGG CGTATAGTTT GTTAGAACAG TTACGTGGTG GTAACACTGA CCCTGCTGTA
CGTGATGCAT TCAATAAAGC GAAGCAGGAT CTTGGTTACG GCATGTTGCT TAAGCGTTAT
ACGGAAAACG TAGCTGATGC GACTGAAGAA CAAATTCAGT TAGCTGCTCA AGACTCTATT
CCGCGCGTAC TGCCGCTTTA TTTCGCCTTC CGCATCATGG TGGCCTGTGG CTTCCTGATG
TTGCTGATTA TTGGGCTGGC GTTCTATAAC GTGGTTCGTG GTCGGATTGG TGAGAAAAAA
TGGCTTCTGC GTGCCGCATT GTATGGTATT CCGTTGCCGT GGATTGCCGT AGAAGCAGGC
TGGTTTGTGG CCGAGTATGG CCGTCAACCT TGGGCCATCG GTGAAGTATT GCCGACAGCA
GTCGCCAACT CATCAGTTAC TGCCGGGGAA ATACTGTTCT CGATGGCGTT GATTTGCGGT
TTGTATACGC TGTTCCTGAT TGCAGAAATG TACCTGATGT TCAAATTTGC GCGCCTTGGG
CCTAGCAGCC TGAAAACTGG CCGCTATCAT TTTGAACAGC CGACTGCCCC AGTGCAGGAA
GCACGGTAA
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| Protein sequence | MFDIVELSRL QFALTAMYHF LFVPLTLGLA FLLAIMESVY VLSGKQIYKD MTKFWGKLFA
INFALGVATG LTMEFQFGTN WSYFSHYVGD IFGAPLAIEG LMAFFLESTF VGLFFFGWDR
LTKHQHLAVT WLVALGSNFS ALWILVANGW MQNPIASDFN FETMRMEMLS FSELVLNPVA
QVKFVHTVAA GYVTGAMFIL GISSYYLLKG RDIPFAKRSF AIAASFGLAS VLSVIVLGDE
SGYEMGDVQK TKLAAIEAEW ETQPPPAAFT LFAIPNQETM ENRFAIQIPY ALGLIATRSL
DTPVIGLRDL MSQHEVRIRN GIQAYSLLEQ LRGGNTDPAV RDAFNKAKQD LGYGMLLKRY
TENVADATEE QIQLAAQDSI PRVLPLYFAF RIMVACGFLM LLIIGLAFYN VVRGRIGEKK
WLLRAALYGI PLPWIAVEAG WFVAEYGRQP WAIGEVLPTA VANSSVTAGE ILFSMALICG
LYTLFLIAEM YLMFKFARLG PSSLKTGRYH FEQPTAPVQE AR
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