Gene YpsIP31758_2867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2867 
Symbolpal 
ID5386448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3237176 
End bp3237682 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content48% 
IMG OID640865867 
Productpeptidoglycan-associated outer membrane lipoprotein 
Protein accessionYP_001401830 
Protein GI153948068 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.8592e-19 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTGA ACAAAGTGCT AAAAGGGCTA ATGTTGGCTT TGCCTGTTCT GGCTGTGGCG 
GCTTGTAGTT CCAACAAAAG CGCAAATAAT GACCAATCTG GCATGGGCGC TGGCACTGGT
ACAGAGAACG GCAGCAACCT GTCTTCTGAA GAGCAAGCAC GTCTTCAGAT GCAAGAACTG
CAAAAGAACA ACATCGTTTA CTTCGGTTTC GATAAATACG ATATCGGTTC TGACTTCGCT
CAAATGCTGG ATGCACATGC TGCATTCCTG CGTAGCAACC CATCTTACAA AGTTGTTGTT
GAAGGCCACG CGGATGAACG CGGTACGCCA GAATACAACA TCGCTTTGGG TGAGCGTCGT
GCTAGCGCAG TGAAAATGTA CCTGCAAGGT AAAGGCGTTT CTGCTGACCA GATCTCTATC
GTTTCTTACG GTAAAGAGAA ACCAGCAGTA CTGGGCCATG ACGAAGCAGC CTTTGCTAAA
AACCGTCGTG CAGTTCTGGT TTACTAA
 
Protein sequence
MQLNKVLKGL MLALPVLAVA ACSSNKSANN DQSGMGAGTG TENGSNLSSE EQARLQMQEL 
QKNNIVYFGF DKYDIGSDFA QMLDAHAAFL RSNPSYKVVV EGHADERGTP EYNIALGERR
ASAVKMYLQG KGVSADQISI VSYGKEKPAV LGHDEAAFAK NRRAVLVY