Gene YpsIP31758_2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2811 
Symbol 
ID5386725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3176087 
End bp3176797 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID640865803 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001401774 
Protein GI153949159 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCATT CGACTCCTCA TTCCGTTACA CCGCCGTCAC CGGCGACCAC CAGAGGTGAA 
CAAGCCCGCC AACAGTTACT TCAAGCCGCG ATTGAGTTGT TCGGTGAATT GGGTCTGAAA
GGCGCGACCA CCCGCGATAT TGCCCAACGG GCGGGGCAGA ATATTGCCGC GATCACCTAC
TATTTCAACT CTAAAGAGGG CCTCTATCTT GCGGTCGCTC AATATATTGC CGATTTTATC
CAGCAGGCGT TCTCACCGCT GGCACAAGAA ATTGATCACT TTTTGCAGTT GCCTGCTGAG
CACCAGCCAC CGGAACAGCA ACTGCACTAT ATTCGTCAAG GGTTATTGGC ATTCAGCCAT
TTAATGACAC AACCTGAAAC GCTAAACCTC AGTAAAATCA TGGCGCGTGA GCAATTATCG
CCAAGCGAAG CCTACCCACT GATCCACACT CAGGCCATTG CCCCATTACA CCAAACATTG
AACCAATTAC TGGCTGCATT TACGGGTACT GATGCCAGTG CAACCAAAAC CATTATTCAT
ACCCATGCTT TGATTGGTGA GGTTTTGGCT TTTCGTCTGG CACGTGAAAC GATTCGCCGA
CAAGCTGGCT GGAAAAGTAT TGGCGAGGCC GAAAGCCAGC TAATTAATCA AGTACTTATT
GAACATATTG ATCTGCTTCT TAACGGACTC CGGGCCAAGG CAACCTTATG A
 
Protein sequence
MSHSTPHSVT PPSPATTRGE QARQQLLQAA IELFGELGLK GATTRDIAQR AGQNIAAITY 
YFNSKEGLYL AVAQYIADFI QQAFSPLAQE IDHFLQLPAE HQPPEQQLHY IRQGLLAFSH
LMTQPETLNL SKIMAREQLS PSEAYPLIHT QAIAPLHQTL NQLLAAFTGT DASATKTIIH
THALIGEVLA FRLARETIRR QAGWKSIGEA ESQLINQVLI EHIDLLLNGL RAKATL