| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2761 |
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| Symbol | |
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| ID | 5387939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3112797 |
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| End bp | 3113912 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640865753 |
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| Product | outer membrane porin protein C |
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| Protein accession | YP_001401725 |
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| Protein GI | 153947134 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000019147 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTC GAGTTCTTTC ATTCATTATT CCGGCCTTAT TGGTTGCAGG CAGTGCAAGT
GCTGCGGAAA TATACAATAA AGACGGTAAT AAACTGGATT TATACGGTAA AATTGACGGG
TTACATTATT TTTCCGATAA CAAGAACCTT GATGGTGACC AATCTTACAT GCGTTTTGGC
CTGAAAGGCG AAACACAAAT CACTGACCAA CTGACTGGTT ATGGTCAGTG GGAATATCAG
GTCAATCTGA ATAAAGCAGA GAATGAGGAC GGGAACCACG ACAGTTTCAC CCGTGTAGGT
TTTGCGGGTC TGAAATTTGC TGACTACGGT TCATTAGATT ATGGCCGTAA CTACGGTGTC
CTGTACGATG TCACTTCATG GACTGACGTT CTGCCAGAAT TTGGTGGTGA TACTTACGGT
GCTGATAACT TCCTGTCACA ACGTGGTAAT GGGATGCTGA CTTACCGTAA CACCAATTTC
TTCGGCTTGG TTGATGGCCT GAACTTTGCT CTGCAATATC AGGGTAAAAA TGGCAGCAGT
AGTGAAACCA ACAATGGTCG CGGTGTAGCA GATCAAAACG GTGATGGCTA CGGGATGTCC
TTGTCTTATG ACCTGGGTTG GGGGGTGAGT GCATCAGCAG CGATGGCGAG TTCTCTGCGT
ACCACTGCGC AAAATGACCT GCAGTATGGC CAGGGTAAGC GTGCCAATGC CTACACCGGT
GGTCTGAAAT ATGATGCGAA CAACGTTTAT CTGGCCGCTA ACTATACTCA GACTTACAAC
CTGACTCGTT TCGGTGATTT CAGCAATAGA TCAAGTGATG CCGCTTTCGG TTTTGCAGAT
AAAGCACACA ACATTGAAGT CGTTGCTCAA TACCAGTTCG ATTTTGGTCT ACGTCCATCA
GTGGCTTACC TGCAATCCAA AGGTAAAGAC ATTGGGATCT ATGGCGATCA AGATCTGCTG
AAATATGTTG ATATTGGTGC GACTTACTTC TTCAACAAAA ACATGTCCAC CTATGTGGAT
TACAAAATCA ACTTGTTGGA TAAAAACGAT TTCACCAAAA ATGCCCGCAT AAATACTGAT
GATATTGTCG CAGTAGGTAT GGTCTATCAG TTCTAA
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| Protein sequence | MKLRVLSFII PALLVAGSAS AAEIYNKDGN KLDLYGKIDG LHYFSDNKNL DGDQSYMRFG
LKGETQITDQ LTGYGQWEYQ VNLNKAENED GNHDSFTRVG FAGLKFADYG SLDYGRNYGV
LYDVTSWTDV LPEFGGDTYG ADNFLSQRGN GMLTYRNTNF FGLVDGLNFA LQYQGKNGSS
SETNNGRGVA DQNGDGYGMS LSYDLGWGVS ASAAMASSLR TTAQNDLQYG QGKRANAYTG
GLKYDANNVY LAANYTQTYN LTRFGDFSNR SSDAAFGFAD KAHNIEVVAQ YQFDFGLRPS
VAYLQSKGKD IGIYGDQDLL KYVDIGATYF FNKNMSTYVD YKINLLDKND FTKNARINTD
DIVAVGMVYQ F
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