| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2719 |
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| Symbol | |
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| ID | 5385702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3073674 |
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| End bp | 3075431 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640865709 |
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| Product | putative helicase |
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| Protein accession | YP_001401684 |
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| Protein GI | 153949131 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00330465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTCA CACTACGGCC TTATCAACGA GAAGCGGTCG ATGCCACGGT GGCTTATTTT
CGACGCCACA CCACACCCGC ACTCATTGTT CTACCAACCG GCGCAGGCAA GAGTTTAGTG
ATCGCAGAAC TTGCGAAACT GGCCCGTGGC CGTGTGTTGG TCTTAGCGCA TGTCAAAGAG
TTGGTGGCAC AGAATCACGC AAAATACTGC GCATACGGTC TTGAGGCCGA TATCTTTGCC
GCCGGGTTGC AACAGCGACA AAGCGAGGGA AAAGTGGTCT TTGGCAGCGT GCAATCGGTG
GCCCGTAATC TGCCGCTATT TGATAGCGCA TTTTCTCTGC TGATTATCGA TGAATGTCAT
CGTATCAGCG ATGAAGATGA CAGCCAGTAT CAGCAAATCA TTCAGCATTT ACGCACGGGG
AATCCGCAGT TACGGCTGTT GGGGCTGACG GCCACCCCTT ATCGGCTGGG GAAAGGCTGG
ATTTATCAGT TCCACTATCA CGGTATTACT CGTGGTGATG AAAAAGCCCT GTTCCGTGAC
TGTATTTATG AATTACCGCT GCGTTATATG ATTAAACATG GCTTTCTGGT GCCACCTGAA
CGGCTGGACA TGCCGGTCGT ACAGTATGAT TTCAGCCGCC TGACCAGCAA CAGTGATGGC
TTGTTCCGTG AGGCAGATTT AGATCGAGAA CTTAAGCAAC AACAAAGAAT TACCCCACAT
ATTGTTAGCC AAATAATCGA ATATGCGGCT CAGCGTCGCG GTGTGATGAT TTTTGCCGCC
ACCGTAGAGC ACGCCAAAGA AGTCTATGGC CTGTTGCCCA AAGGTGAAGC CGCGTTGGTC
AGCGCGGGGA CCCCACCTGC GGAACGGGAT GCGCTGATCA ATGCCTTTAA ACAGCAACAA
TTGCGCTATT TGGTCAATGT GTCGGTACTG ACCACCGGTT TTGATGCCCC CCATGTGGAT
CTGATTGCCA TTCTTCGTCC AACCGAATCC ATCAGTTTAT ATCAACAAAT TGTTGGCCGA
GGCCTGCGGC TGTTTCCCGG TAAAGAGGAT TGCTTGATTC TGGATTATGC GGGTAATCCC
CATGACCTTT TCACGCCAGA AGTGGGCACG AGCAAACCTC ACAGCGGGAG CCAACCAGTA
CAAGTCTTCT GCCCCGATTG TGGTTTTGCC AATATCTTCT GGGGGAAATG CACTGAGTCC
GGCGAAATAA TTGAGCACTA TGGCCGCCGC TGTCAGGGCT GGTTTGAGGA TGATCAGGGT
GCACGTGCGC AATGTGACTA CCGTTTTCGC TTTAAATCCT GCCCACATTG CGGAGCAGAA
AATGATATTG CCGCCCGTCG CTGCCATCAA TGCCAGGCGG TTTTGGTCGA TCCCGACGAT
ATGCTGAAAG CCGCCCTGAA ACTGAAAGAT GCGCTGGTAT TGCGCTGTGG CGGTATGCAG
CTAGAAACGG GCCAAGACGC CAAAGGCGAG TGGCTGAAAG CGACCTATTA CGATGAGGAT
GGCACCAATA CCAGTGAGCG CTTCAGATTA ACCACACCTG CACAACGTAT GGCATTCGAA
CAGATATTCC TGCGCCCTCA CCAGCGCGCA CCGGGCATTG CCCTTAAATG GCACACCGCC
GCTGATATTA TCGCGCAGCA GGCGTTGCTA CGTTATCCGG ATTTTGTGGT CGCCCGCCGT
CGGGGGCAGT GGTGGCAAAT CAGGGAGAAG GTATTTGATT ACAAGGGGCG TTTTCGGCGG
GCCGATGCCC TTGCCTGA
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| Protein sequence | MAFTLRPYQR EAVDATVAYF RRHTTPALIV LPTGAGKSLV IAELAKLARG RVLVLAHVKE
LVAQNHAKYC AYGLEADIFA AGLQQRQSEG KVVFGSVQSV ARNLPLFDSA FSLLIIDECH
RISDEDDSQY QQIIQHLRTG NPQLRLLGLT ATPYRLGKGW IYQFHYHGIT RGDEKALFRD
CIYELPLRYM IKHGFLVPPE RLDMPVVQYD FSRLTSNSDG LFREADLDRE LKQQQRITPH
IVSQIIEYAA QRRGVMIFAA TVEHAKEVYG LLPKGEAALV SAGTPPAERD ALINAFKQQQ
LRYLVNVSVL TTGFDAPHVD LIAILRPTES ISLYQQIVGR GLRLFPGKED CLILDYAGNP
HDLFTPEVGT SKPHSGSQPV QVFCPDCGFA NIFWGKCTES GEIIEHYGRR CQGWFEDDQG
ARAQCDYRFR FKSCPHCGAE NDIAARRCHQ CQAVLVDPDD MLKAALKLKD ALVLRCGGMQ
LETGQDAKGE WLKATYYDED GTNTSERFRL TTPAQRMAFE QIFLRPHQRA PGIALKWHTA
ADIIAQQALL RYPDFVVARR RGQWWQIREK VFDYKGRFRR ADALA
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