Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2717 |
Symbol | bcr |
ID | 5385466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3071130 |
End bp | 3072329 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640865707 |
Product | bicyclomycin/multidrug efflux system |
Protein accession | YP_001401682 |
Protein GI | 153948525 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0392308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCAAAAAA ACCGGACATC CCACATTGGT TTGATTTTTA TCCTTGGGTT GTTGTCGATG CTGATGCCTT TGGCGATTGA TATGTATCTG CCAAGCATGC CGATTATTGC GCAGGAGTTT GGGGTCGAGA GTGGCCGTGT GCAGATGACG CTGAGCGCAT ATGTGCTGGG TTTTGCCATT GGGCAAATGT TCTATGGGCC AATGGCTGAC AGCATCGGGC GTAAGCCGGT CATTTTTTGG GGGACGCTGA TTTTTGCGCT TGCAGGTATG GCATGTGCGT TGGTGCAGTC GGTCGAGCAA CTCATTAATA TGCGCTTCCT GCATGGCTTA TCCGCCGCCG CCGCAAGTGT GGTGATTAAT GCCTTGATGC GCGATATGTT CACCAAAGAT GAGTTCTCCC GAATGATGTC TTTCGTGGTA TTGGTGATGA CGATTGCCCC CTTGCTCGCA CCCATTATCG GTGGTGCACT GTTGGTGTGG TTTAGCTGGC ATGCTATTTT CTGGACCATG GCGGGGGCGG CACTGGTTGG TGCGGTGTTA GTGGCGCTGT TTATCCAAGA AACATTGCCT CCTGAACGGC GACAGAAATT TCATCTGCGC ACGACCATAG GTAATTTTGG CTCGTTATTT CGCCACAAAC GCGTACTGAG CTATATGCTG GCCAGTGGTT TCTCTTTTGC CGGTATGTTC TCATTCCTCA GCGCCGGTCC TTTTGTTTAT ATCGATTTAA ACGGTGTTTC CCCGCAAAAC TTTGGTTATT ACTTTGCACT GAACATTGTC TTTTTGTTCT TGATGACCTT TATCAACAGC CGTAATGTGC GCCGTTTCGG GGCGCTGAAA ATGTTCCGTT TTGGCCTGAT AGTGCAATTT GTGATGGGGA TCTGGCTGGT AGTGGTTTGT GTCGCTGGCC TAGGATTCTG GGCCCTAGTT CTGGGCGTAG CTGCCTATGT TGGGTGTATC GCAATGATCA CGTCTAACGC GATGGCAGTG ATATTAGATG ATTTCCCGCA TATGGCAGGG ACCGCCTCTT CTTTGGCGGG GACGTTGCGC TTTGGTATTG GTGCGGTGGT GGGGACGTTA CTGTCGATGG CTTCGTCGCG CAGCGCCTGG CCAATGGTCA GTTCAATGGC ATTTTGTATT ATTGTCGCGA TGTTGTTGTA TCTGTATGCC AGTCGCCCAA GTCATAAAAC CGTGTCATAA
|
Protein sequence | MQKNRTSHIG LIFILGLLSM LMPLAIDMYL PSMPIIAQEF GVESGRVQMT LSAYVLGFAI GQMFYGPMAD SIGRKPVIFW GTLIFALAGM ACALVQSVEQ LINMRFLHGL SAAAASVVIN ALMRDMFTKD EFSRMMSFVV LVMTIAPLLA PIIGGALLVW FSWHAIFWTM AGAALVGAVL VALFIQETLP PERRQKFHLR TTIGNFGSLF RHKRVLSYML ASGFSFAGMF SFLSAGPFVY IDLNGVSPQN FGYYFALNIV FLFLMTFINS RNVRRFGALK MFRFGLIVQF VMGIWLVVVC VAGLGFWALV LGVAAYVGCI AMITSNAMAV ILDDFPHMAG TASSLAGTLR FGIGAVVGTL LSMASSRSAW PMVSSMAFCI IVAMLLYLYA SRPSHKTVS
|
| |