Gene YpsIP31758_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2707 
Symbolspr 
ID5385110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3061368 
End bp3061952 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content46% 
IMG OID640865697 
Productputative outer membrane lipoprotein 
Protein accessionYP_001401672 
Protein GI153947899 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAAGT CTCAACCTAT TCTGAGATAT ATTCTGCGGG CGCTCCCTGC AGTTGCAGCA 
GCAGTAATGT TATCCGCATG CAGTTCACCA CAGGCTTCGA ATGTAAATAA TACGCAAACT
GAGATGCGTG CAGTTAATGA CAAAGATGGG CTTTTACTGC AAGCCTCTCA GGATGAATTC
GAAGCGATGG TTCGCAACGT TGACATCAAG TCAAAGATTT TAGAACAGTA TGCAGGTTGG
AAAGGTGTTC GTTATCGTTT AGGCGGTAGC AGTAAACGCG GTATTGATTG TTCCGCATTT
GTACAAACCA CTTTCCGTGA ACAGTTTGGT ATGGATTTGC CGCGCTCAAC ATCTCAGCAG
CAGGATCTCG GCAAGAAAGT CCAGCGGACT AAATTACGTC CAGGTGATCT TGTTCTATTC
CGCGCAGGCT CAACAGGGCG TCATGTCGGT ATCTATTTAG GTAACGATAA ATTTGTTCAT
GCATCGACCA GTGCCGGTGT AACGATATCG AACCTGAATG ACGATTACTG GAATAAGCGT
TATCGTGATG GGCGTCGAGT GCTAAGTAGC AGTTCGAGCA GCTAG
 
Protein sequence
MVKSQPILRY ILRALPAVAA AVMLSACSSP QASNVNNTQT EMRAVNDKDG LLLQASQDEF 
EAMVRNVDIK SKILEQYAGW KGVRYRLGGS SKRGIDCSAF VQTTFREQFG MDLPRSTSQQ
QDLGKKVQRT KLRPGDLVLF RAGSTGRHVG IYLGNDKFVH ASTSAGVTIS NLNDDYWNKR
YRDGRRVLSS SSSS