Gene YpsIP31758_2697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2697 
Symbolmtr 
ID5387157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3052142 
End bp3053386 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content51% 
IMG OID640865687 
Producttryptophan-specific transport protein 
Protein accessionYP_001401662 
Protein GI153950865 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00837] aromatic amino acid transport protein 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATGG CCTTATCCCA ACCGTTGTCA CGGCCTTCCG TTTTGGGTGG CGCGATGATT 
GTCGCAGGTA CCGCAGTGGG TGCGGGCATG TTCTCAATCC CAATCGTGAC AGCCGGGGTA
TGGTTCAGCG GCTCAGTGGG GCTGCTGATC TATACCTGGG CATGTATGTT AGTGTCCGGG
CTGATGATTC TGGAAGCTAA CCTGAACTAC CCAAGTGGCG CCAGTTTCCA CACCATGGTG
CAAGACCTGC TAGGCAAGGT GTGGAGCTCA ATTAACGGGC TGTCCATTAC CTTTGTGCTC
TACATTCTGA CCTACGCCTA TATCTCCGCC GGTGGTTCGA TCATCGCCCA TACGCTGCAA
AACGTAGCCG GAATTGGCCA GACCAGCGCA GGCTTTATCT TTGCACTTTT GGTGGCCTTT
ATCGTGTGGT TATCCACCCG AGCAGTGGAT CGCCTCAGTA CAATATTAAT CGGCGGCATG
GTTATCACAT TTGTCATGTC TGTCGGTGAT ATGTTCAGCC ATGTAGAAAG TGCGGTGTTG
TTTAATCAGA CAGACAGTAA TGCCCACTAT CTGCCCTATG CACTGGCGGC ATTGCCTTAT
TTGCTGACCT CTTTTGGCTA CCACGGCAAT GTGCCGGGAC TGGTGAAGTA CTACAACAAC
GACAGCAAAG CCGTTGTGCG CAGCCTGCTG TACGGAACAT TGATTGCCTT GGTGATTTAT
CTCCTTTGGC AGTATGCCAT TCAGGGCAAT ATCGCCCGGG ATGCCTTCAA ACAGGTTATT
GCCGATGGCG GTAATATCGG CAATCTATTG CAACAAATGG ACACCGTTTC TGCCAGTAAA
GCCACCAGCC AGTTACTCAA TGCCTTCTCT TATATGGCAC TGGCCAGTTC GTTCCTTGGC
GTGTCGCTCG GGTTGTTTGA TTATATTTCT GATTTATTTG ACTTTACCGA TGACCGCAGC
GGGCGAACTA AATCAGCATT AATGACCTTT GTCCCTCCGA CTCTCGGTGC CCTGCTGTTC
CCGGATGGCT TCTTATATGC CATTGGCTTT GCGGGGTTAG CCGCCACCAT TTGGGCGGTT
ATTGTGCCCG CATTAATGGC GCGAGCCAGC CGTAAACGCT TCCCACAAGC CCGTTACCGT
GCTCCCGGAG GCCGTTTTAT GATTGGTTTT ATTATCCTGT TTGGCCTGGT CAATGCGGTA
GCCCATATTT CAGCCTTGTT CGGCCTATTG CCGGTTTATC AATAG
 
Protein sequence
MSMALSQPLS RPSVLGGAMI VAGTAVGAGM FSIPIVTAGV WFSGSVGLLI YTWACMLVSG 
LMILEANLNY PSGASFHTMV QDLLGKVWSS INGLSITFVL YILTYAYISA GGSIIAHTLQ
NVAGIGQTSA GFIFALLVAF IVWLSTRAVD RLSTILIGGM VITFVMSVGD MFSHVESAVL
FNQTDSNAHY LPYALAALPY LLTSFGYHGN VPGLVKYYNN DSKAVVRSLL YGTLIALVIY
LLWQYAIQGN IARDAFKQVI ADGGNIGNLL QQMDTVSASK ATSQLLNAFS YMALASSFLG
VSLGLFDYIS DLFDFTDDRS GRTKSALMTF VPPTLGALLF PDGFLYAIGF AGLAATIWAV
IVPALMARAS RKRFPQARYR APGGRFMIGF IILFGLVNAV AHISALFGLL PVYQ