Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2697 |
Symbol | mtr |
ID | 5387157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3052142 |
End bp | 3053386 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640865687 |
Product | tryptophan-specific transport protein |
Protein accession | YP_001401662 |
Protein GI | 153950865 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGATGG CCTTATCCCA ACCGTTGTCA CGGCCTTCCG TTTTGGGTGG CGCGATGATT GTCGCAGGTA CCGCAGTGGG TGCGGGCATG TTCTCAATCC CAATCGTGAC AGCCGGGGTA TGGTTCAGCG GCTCAGTGGG GCTGCTGATC TATACCTGGG CATGTATGTT AGTGTCCGGG CTGATGATTC TGGAAGCTAA CCTGAACTAC CCAAGTGGCG CCAGTTTCCA CACCATGGTG CAAGACCTGC TAGGCAAGGT GTGGAGCTCA ATTAACGGGC TGTCCATTAC CTTTGTGCTC TACATTCTGA CCTACGCCTA TATCTCCGCC GGTGGTTCGA TCATCGCCCA TACGCTGCAA AACGTAGCCG GAATTGGCCA GACCAGCGCA GGCTTTATCT TTGCACTTTT GGTGGCCTTT ATCGTGTGGT TATCCACCCG AGCAGTGGAT CGCCTCAGTA CAATATTAAT CGGCGGCATG GTTATCACAT TTGTCATGTC TGTCGGTGAT ATGTTCAGCC ATGTAGAAAG TGCGGTGTTG TTTAATCAGA CAGACAGTAA TGCCCACTAT CTGCCCTATG CACTGGCGGC ATTGCCTTAT TTGCTGACCT CTTTTGGCTA CCACGGCAAT GTGCCGGGAC TGGTGAAGTA CTACAACAAC GACAGCAAAG CCGTTGTGCG CAGCCTGCTG TACGGAACAT TGATTGCCTT GGTGATTTAT CTCCTTTGGC AGTATGCCAT TCAGGGCAAT ATCGCCCGGG ATGCCTTCAA ACAGGTTATT GCCGATGGCG GTAATATCGG CAATCTATTG CAACAAATGG ACACCGTTTC TGCCAGTAAA GCCACCAGCC AGTTACTCAA TGCCTTCTCT TATATGGCAC TGGCCAGTTC GTTCCTTGGC GTGTCGCTCG GGTTGTTTGA TTATATTTCT GATTTATTTG ACTTTACCGA TGACCGCAGC GGGCGAACTA AATCAGCATT AATGACCTTT GTCCCTCCGA CTCTCGGTGC CCTGCTGTTC CCGGATGGCT TCTTATATGC CATTGGCTTT GCGGGGTTAG CCGCCACCAT TTGGGCGGTT ATTGTGCCCG CATTAATGGC GCGAGCCAGC CGTAAACGCT TCCCACAAGC CCGTTACCGT GCTCCCGGAG GCCGTTTTAT GATTGGTTTT ATTATCCTGT TTGGCCTGGT CAATGCGGTA GCCCATATTT CAGCCTTGTT CGGCCTATTG CCGGTTTATC AATAG
|
Protein sequence | MSMALSQPLS RPSVLGGAMI VAGTAVGAGM FSIPIVTAGV WFSGSVGLLI YTWACMLVSG LMILEANLNY PSGASFHTMV QDLLGKVWSS INGLSITFVL YILTYAYISA GGSIIAHTLQ NVAGIGQTSA GFIFALLVAF IVWLSTRAVD RLSTILIGGM VITFVMSVGD MFSHVESAVL FNQTDSNAHY LPYALAALPY LLTSFGYHGN VPGLVKYYNN DSKAVVRSLL YGTLIALVIY LLWQYAIQGN IARDAFKQVI ADGGNIGNLL QQMDTVSASK ATSQLLNAFS YMALASSFLG VSLGLFDYIS DLFDFTDDRS GRTKSALMTF VPPTLGALLF PDGFLYAIGF AGLAATIWAV IVPALMARAS RKRFPQARYR APGGRFMIGF IILFGLVNAV AHISALFGLL PVYQ
|
| |