Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2675 |
Symbol | nfo |
ID | 5386421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3028876 |
End bp | 3029733 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865665 |
Product | endonuclease IV |
Protein accession | YP_001401640 |
Protein GI | 153949100 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTG TCGGTGCACA TGTCAGCGCA GCGGGTGGTG TAGATCAAGC GGTAATTAGA GCGCATGAAC TTGAGGCCAC GGCCTTTGCG CTGTTTACCA AGAATCAACG TCAATGGCGG GCCGCCCCTT TAGCGGAAGA CGTAATTGAG AAATTTAAAC TCACGTGTGA GAAGTACGGC TATACCTCGG CACAAATTCT GCCTCACGAT AGTTACCTGA TTAATCTCGG GCACCCAGTC ACCGAGGCAC TGGAAAAATC CCGTGAAGCC TTTATCGATG AGTTAGTTCG CTGCCAGCAA CTGGGGTTAT CATTACTGAA CTTCCATCCC GGTAGCCATT TACTGCAAAT TGATGAAGAC CAATGCTTGG CGCGGATTGC CGAATCGATC AACATCGCGT TAGACGCCAC TGAAGGCGTG ACTGCAGTAA TTGAAAACAC CGCAGGTCAG GGCAGTAACC TGGGCTTTAA GTTTGAACAT TTAGCCGCCA TCATTGAAAA AGTGGAAGAT AAAAGCCGCG TCGGCGTCTG TATTGATACC TGCCATGCTT TCGCCGCTGG CTATGATTTA CGGACTGAAG AAGATTGTGA GCACACCTTC GCGGCATTGG GCAAGATCGT CGGCTTCCAG TATCTGCGTG GGATGCATCT TAATGATGCG AAAAGCGAAT TTAACAGCCG GGTTGACCGC CACCACAGCC TGGGTGAAGG CAATATTGGC AAAACCGTAT TCAGCTATAT TATGCGCGAC TCACGTTTCG ATAATATCCC ATTGATTCTG GAAACGGTGA ATATGGATAT CTGGGCCGAA GAGATCGCCT GGCTGAAATC ACAGACAGAG ATTGAGCCCT CGTTGTAA
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Protein sequence | MKFVGAHVSA AGGVDQAVIR AHELEATAFA LFTKNQRQWR AAPLAEDVIE KFKLTCEKYG YTSAQILPHD SYLINLGHPV TEALEKSREA FIDELVRCQQ LGLSLLNFHP GSHLLQIDED QCLARIAESI NIALDATEGV TAVIENTAGQ GSNLGFKFEH LAAIIEKVED KSRVGVCIDT CHAFAAGYDL RTEEDCEHTF AALGKIVGFQ YLRGMHLNDA KSEFNSRVDR HHSLGEGNIG KTVFSYIMRD SRFDNIPLIL ETVNMDIWAE EIAWLKSQTE IEPSL
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