Gene YpsIP31758_2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2675 
Symbolnfo 
ID5386421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3028876 
End bp3029733 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content49% 
IMG OID640865665 
Productendonuclease IV 
Protein accessionYP_001401640 
Protein GI153949100 
COG category[L] Replication, recombination and repair 
COG ID[COG0648] Endonuclease IV 
TIGRFAM ID[TIGR00587] apurinic endonuclease (APN1) 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTG TCGGTGCACA TGTCAGCGCA GCGGGTGGTG TAGATCAAGC GGTAATTAGA 
GCGCATGAAC TTGAGGCCAC GGCCTTTGCG CTGTTTACCA AGAATCAACG TCAATGGCGG
GCCGCCCCTT TAGCGGAAGA CGTAATTGAG AAATTTAAAC TCACGTGTGA GAAGTACGGC
TATACCTCGG CACAAATTCT GCCTCACGAT AGTTACCTGA TTAATCTCGG GCACCCAGTC
ACCGAGGCAC TGGAAAAATC CCGTGAAGCC TTTATCGATG AGTTAGTTCG CTGCCAGCAA
CTGGGGTTAT CATTACTGAA CTTCCATCCC GGTAGCCATT TACTGCAAAT TGATGAAGAC
CAATGCTTGG CGCGGATTGC CGAATCGATC AACATCGCGT TAGACGCCAC TGAAGGCGTG
ACTGCAGTAA TTGAAAACAC CGCAGGTCAG GGCAGTAACC TGGGCTTTAA GTTTGAACAT
TTAGCCGCCA TCATTGAAAA AGTGGAAGAT AAAAGCCGCG TCGGCGTCTG TATTGATACC
TGCCATGCTT TCGCCGCTGG CTATGATTTA CGGACTGAAG AAGATTGTGA GCACACCTTC
GCGGCATTGG GCAAGATCGT CGGCTTCCAG TATCTGCGTG GGATGCATCT TAATGATGCG
AAAAGCGAAT TTAACAGCCG GGTTGACCGC CACCACAGCC TGGGTGAAGG CAATATTGGC
AAAACCGTAT TCAGCTATAT TATGCGCGAC TCACGTTTCG ATAATATCCC ATTGATTCTG
GAAACGGTGA ATATGGATAT CTGGGCCGAA GAGATCGCCT GGCTGAAATC ACAGACAGAG
ATTGAGCCCT CGTTGTAA
 
Protein sequence
MKFVGAHVSA AGGVDQAVIR AHELEATAFA LFTKNQRQWR AAPLAEDVIE KFKLTCEKYG 
YTSAQILPHD SYLINLGHPV TEALEKSREA FIDELVRCQQ LGLSLLNFHP GSHLLQIDED
QCLARIAESI NIALDATEGV TAVIENTAGQ GSNLGFKFEH LAAIIEKVED KSRVGVCIDT
CHAFAAGYDL RTEEDCEHTF AALGKIVGFQ YLRGMHLNDA KSEFNSRVDR HHSLGEGNIG
KTVFSYIMRD SRFDNIPLIL ETVNMDIWAE EIAWLKSQTE IEPSL