Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2672 |
Symbol | |
ID | 5384563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3026094 |
End bp | 3026966 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640865662 |
Product | putative DNA-binding transcriptional regulator |
Protein accession | YP_001401637 |
Protein GI | 153947308 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATATAA CCTTGCGTCA ACTTGAAGTC TTTACTGAGG TACTAAAAAG TGGCTCAACG ACCCAAGCCT CCGTGGTGCT TGCGCTTTCA CAATCAGCCG TTAGCGCAGC ATTGGCGGAT TTGGAAGGGC AACTTGGGGT GCAGCTTTTT GACCGCGTGG GTAAGCGGTT AGTCACAAAT GAGCATGGGC GATTGCTTTA TCCCAAAGCG TTGGCATTAC TCGATCAGGC CATCGAAATC GAACAGCTGT TTTTGCATGA TTTGGGCGCA TTACGCATCG CGGCCAGCAG TACGATTGGT AATTACATGC TACCGGGGAT GATTGCCAAA TATCGCCGTG ACTTCCCCGG AACACCTTTA GAGCTGAATA TCGGTAATAG CCAGGATGTG ATCGAAGCTG TCGCCGACTT TCGCGGTGAC CTTGGCCTGA TTGAAGGGCC GTGTCATATG CCAGAATTGG TCACGCAAAA TTGGCTACGG GACGAGCTAG TGGTGTTTGC CGCCCCTGAT AGCCCCTTGT GCCATAAGGC GCTAACGTTA GTCGACCTTG CTGATGCCGA CTGGATTTTA CGTGAGCGTG GCTCAGGAAC GCGTGAAGTT CTCGATCATT TACTCTTGGC ACAGTTACCC CACTTCAAGT TAGTGATGGA GTTGGGTAAC TCCGAGGCAA TAAAGCGCGC TGTTCGCTAC GGGATGGGGG TCAGTTGCCT TTCGCGGCGA GTGATTGCTG ATCAACTCGC CAGCGGTGAG TTGGTCGAGC TTAATATTCC TTTACCGCCC TTAATTCGCA CCTTGTATCT AATCCACCAT CGGCAAAAAC ATATCTCCAA CGCTTTGCTG CGCTTTCTTA GTTATTGTCA GGAAGAAGAG TAA
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Protein sequence | MHITLRQLEV FTEVLKSGST TQASVVLALS QSAVSAALAD LEGQLGVQLF DRVGKRLVTN EHGRLLYPKA LALLDQAIEI EQLFLHDLGA LRIAASSTIG NYMLPGMIAK YRRDFPGTPL ELNIGNSQDV IEAVADFRGD LGLIEGPCHM PELVTQNWLR DELVVFAAPD SPLCHKALTL VDLADADWIL RERGSGTREV LDHLLLAQLP HFKLVMELGN SEAIKRAVRY GMGVSCLSRR VIADQLASGE LVELNIPLPP LIRTLYLIHH RQKHISNALL RFLSYCQEEE
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