Gene YpsIP31758_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2672 
Symbol 
ID5384563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3026094 
End bp3026966 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content51% 
IMG OID640865662 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001401637 
Protein GI153947308 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATAA CCTTGCGTCA ACTTGAAGTC TTTACTGAGG TACTAAAAAG TGGCTCAACG 
ACCCAAGCCT CCGTGGTGCT TGCGCTTTCA CAATCAGCCG TTAGCGCAGC ATTGGCGGAT
TTGGAAGGGC AACTTGGGGT GCAGCTTTTT GACCGCGTGG GTAAGCGGTT AGTCACAAAT
GAGCATGGGC GATTGCTTTA TCCCAAAGCG TTGGCATTAC TCGATCAGGC CATCGAAATC
GAACAGCTGT TTTTGCATGA TTTGGGCGCA TTACGCATCG CGGCCAGCAG TACGATTGGT
AATTACATGC TACCGGGGAT GATTGCCAAA TATCGCCGTG ACTTCCCCGG AACACCTTTA
GAGCTGAATA TCGGTAATAG CCAGGATGTG ATCGAAGCTG TCGCCGACTT TCGCGGTGAC
CTTGGCCTGA TTGAAGGGCC GTGTCATATG CCAGAATTGG TCACGCAAAA TTGGCTACGG
GACGAGCTAG TGGTGTTTGC CGCCCCTGAT AGCCCCTTGT GCCATAAGGC GCTAACGTTA
GTCGACCTTG CTGATGCCGA CTGGATTTTA CGTGAGCGTG GCTCAGGAAC GCGTGAAGTT
CTCGATCATT TACTCTTGGC ACAGTTACCC CACTTCAAGT TAGTGATGGA GTTGGGTAAC
TCCGAGGCAA TAAAGCGCGC TGTTCGCTAC GGGATGGGGG TCAGTTGCCT TTCGCGGCGA
GTGATTGCTG ATCAACTCGC CAGCGGTGAG TTGGTCGAGC TTAATATTCC TTTACCGCCC
TTAATTCGCA CCTTGTATCT AATCCACCAT CGGCAAAAAC ATATCTCCAA CGCTTTGCTG
CGCTTTCTTA GTTATTGTCA GGAAGAAGAG TAA
 
Protein sequence
MHITLRQLEV FTEVLKSGST TQASVVLALS QSAVSAALAD LEGQLGVQLF DRVGKRLVTN 
EHGRLLYPKA LALLDQAIEI EQLFLHDLGA LRIAASSTIG NYMLPGMIAK YRRDFPGTPL
ELNIGNSQDV IEAVADFRGD LGLIEGPCHM PELVTQNWLR DELVVFAAPD SPLCHKALTL
VDLADADWIL RERGSGTREV LDHLLLAQLP HFKLVMELGN SEAIKRAVRY GMGVSCLSRR
VIADQLASGE LVELNIPLPP LIRTLYLIHH RQKHISNALL RFLSYCQEEE