Gene YpsIP31758_2610 details

Gene Information

• Locus tag: YpsIP31758_2610
• Symbol: macB
• ID: 5385302
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 2964330
• End bp: 2966279
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640865599
• Product: macrolide transporter ATP-binding /permease protein
• Protein accession: YP_001401575
• Protein GI: 153949325
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGCAT TGCTTGAATT AGAAGGCATC CGCCGTAGTT ATCAGTCTGG CGAAGAAATT 
GTCGATGTGT TGCAGGATGT CTCATTGACC ATCAATGCGG GTGAACTGGT CGCGATTATT 
GGCGCTTCTG GCTCGGGTAA GTCGACATTG ATGAATATCT TGGGATGTTT GGATAAACCC 
AGTGCCGGTA TTTATCGTGT CGCTGGGCAG AATGTTGATG AGTTGGATGA CGATGCGTTG 
GCGGCACTGC GCCGTGAACA TTTTGGTTTT ATTTTCCAGC GTTATCACCT GCTTCCGCAT 
CTCAGTGCCG CGCATAATGT GGAAGTCCCG GCGGTTTATG CAGGGTTGGG TAAACATGAG 
CGCCGTGAGC GAGCAAACAT GTTGTTGACC CGGCTGGGGC TGGGGGAACG TGTGAGCTAT 
CAGCCTAACC AGCTTTCAGG TGGGCAACAA CAACGGGTCA GTATTGCCAG GGCGCTGATG 
AATGGCGGGC AAGTTATCCT CGCCGATGAG CCTACTGGTG CGTTGGATAG CCATTCTAGT 
GTCGAGGTGA TGGCTATCCT GAAACAACTG CAACAACAGG GGCATACGGT CATTATTGTG 
ACTCATGATC CTACAGTTGC TGCGCAGGCT GAGCGAGTTA TTGAGATCAA AGATGGCCGT 
ATTATGGCCG ATTCAGGATC AAAAAATGAG CAAATCGTCG CGGCGGCGGA ACTGATGAGT 
TTAACGCCAG CGGCACCTTC ATGGCAGCAA CTGGTTGGCC GTTTCCGTGA GGCTCTGTTA 
ATGGCCTGGC GCGCCATGTC GGCGAATAAA ATGCGTACCG CGCTGACGAT GCTAGGTATC 
ATTATTGGTA TTGCGTCGGT GGTATCGATC TTGGTTGTCG GTGATGCCGC GAAGCAGCTT 
GTCTTGGCGG ATATTCGCGC TATCGGTACG AACACCATTG ATATCTATCC CGGTAAAGAT 
TTTGGTGATG ATGACCCCAG TACCCGCCAA GCGTTGGTAC ATGACGATAT GGCGGCATTG 
AAAGCGCAAT CTTACGTCAG TGCGGTATCT CCCTCTATCG GCGGCAGTAT GCGGCTGCGT 
TTTGGCAATA TTGATGTGGC AGCCAGTGTC TTGGGAGTCA GTGACGAGTA CTTTCGGGTA 
TTTGGTATGG CGATGGAACA AGGGGCACCT ATCACCCGCG AGCAGGTTGA GCGGCAGGCC 
CAGACCGTGG TTATTGACCT CAATACCCAA CGCCGCCTGT TCCCGCATAT GAAGGATGTG 
GTTGGGCAAG TGATATTGGT GGGCAATATG CCTGCGACTG TGGTTGGCGT GGTAGCAGAA 
AAAAAATCGA TGTTTGGCAG CAATAAAGCA CTGCGGGTGT GGGTGCCCTA CAGTACGATG 
GCCAACCGCT TGATGGGGCG CTCTTATTTT GATTCCATCA CGGTCCGGAT TAAAGAGGGG 
TACAGCAGTA AAGAGGCTGA ACAGCAGTTG GTCAGGTTGT TAACCTTGCG TCACGGCAAA 
AAAGACATAT TTACTTATAA TATGGATAGC CTGTTGCAGA CGGCTGAAAA AACAACGCAG 
ACTATGCAAT TGTTTCTAAC ATTGGTGGCG GTTATTTCAC TGGTGGTTGG CGGAATAGGC 
GTGATGAATA TTATGCTGGT TTCCGTAACC GAGCGGACGC GTGAGATCGG TATCCGTATG 
GCGGTGGGCG CGCGTTCCAG CGACGTTATG CAACAATTTT TGATTGAGGC GGTTCTGGTG 
TGCCTGATAG GTGGGGCGCT TGGTATAACA TTATCCTTTG CCATCGGGCT GATTGTGGAA 
ATGTTCTTAC CTAACTGGCG TATTACTTTC CCCCCTATGG CATTGTTCAG TGCATTTTTA 
TGTTCGACGG TAATTGGCGT GGTGTTTGGC TATTTACCTG CCCGCAGTGC CGCACGGCTT 
AACCCGATTG ATGCGTTAGC TCGTGAATAG 

 

Protein sequence

MAALLELEGI RRSYQSGEEI VDVLQDVSLT INAGELVAII GASGSGKSTL MNILGCLDKP 
SAGIYRVAGQ NVDELDDDAL AALRREHFGF IFQRYHLLPH LSAAHNVEVP AVYAGLGKHE 
RRERANMLLT RLGLGERVSY QPNQLSGGQQ QRVSIARALM NGGQVILADE PTGALDSHSS 
VEVMAILKQL QQQGHTVIIV THDPTVAAQA ERVIEIKDGR IMADSGSKNE QIVAAAELMS 
LTPAAPSWQQ LVGRFREALL MAWRAMSANK MRTALTMLGI IIGIASVVSI LVVGDAAKQL 
VLADIRAIGT NTIDIYPGKD FGDDDPSTRQ ALVHDDMAAL KAQSYVSAVS PSIGGSMRLR 
FGNIDVAASV LGVSDEYFRV FGMAMEQGAP ITREQVERQA QTVVIDLNTQ RRLFPHMKDV 
VGQVILVGNM PATVVGVVAE KKSMFGSNKA LRVWVPYSTM ANRLMGRSYF DSITVRIKEG 
YSSKEAEQQL VRLLTLRHGK KDIFTYNMDS LLQTAEKTTQ TMQLFLTLVA VISLVVGGIG 
VMNIMLVSVT ERTREIGIRM AVGARSSDVM QQFLIEAVLV CLIGGALGIT LSFAIGLIVE 
MFLPNWRITF PPMALFSAFL CSTVIGVVFG YLPARSAARL NPIDALARE