| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2542 |
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| Symbol | ompA |
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| ID | 5384429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2874125 |
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| End bp | 2875198 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640865531 |
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| Product | outer membrane protein A |
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| Protein accession | YP_001401507 |
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| Protein GI | 153947861 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 9.37616e-18 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCGTA AAATGAAAAA GACAGCTATC GCATTAGCAG TGGCACTGGT AGGTTTCGCT
ACAGTAGCGC AAGCCGCACC AAAAGATAAC ACCTGGTACA CCGGTGGTAA ATTGGGTTGG
TCTCAGTATC AAGATACTGG TTCTATCATC AATAACGATG GTCCAACTCA TAAAGATCAG
CTGGGTGCCG GTGCGTTCTT CGGTTACCAA GCAAATCAGT ACCTGGGCTT TGAGATGGGA
TACGACTGGC TTGGTCGTAT GCCTTACAAA GGCGACATCA ATAATGGCGC TTTCAAGGCT
CAAGGCGTTC AGTTAGCAGC TAAACTGAGC TACCCAGTAG CACAAGACCT TGACGTATAT
ACCCGTCTGG GTGGTTTAGT ATGGCGTGCA GATGCTAAAG GCTCCTTCGA TGGTGGTCTT
GACCGTGCTA GCGGCCATGA TACCGGTGTT TCTCCATTGG TAGCTCTGGG TGCTGAATAC
GCATGGACCA AAAACTGGGC AACCCGTATG GAATACCAGT GGGTTAACAA CATCGGCGAC
CGTGAAACCG TTGGTGCTCG TCCAGACAAC GGCCTCCTGA GTGTTGGTGT TTCTTACCGC
TTTGGTCAGG AAGATGCAGC AGCGCCAATC GTTGCTCCAA CACCTGCTCC AGCGCCAATT
GTTGACACTA AGCGTTTCAC ATTAAAATCT GATGTGCTGT TTGGTTTCAA CAAAGCAAAC
CTGAAGCCAG AAGGCCAGCA AGCTCTGGAC CAACTGTACG CACAACTGAG CTCTATCGAT
CCTAAAGATG GTTCTGTAGT TGTTCTGGGC TTTGCTGACC GTATCGGTCA ACCAGCGCCT
AACTTAGCTC TGTCTCAGCG TCGTGCTGAC AGCGTGCGTG ACTACCTGGT TTCTAAAGGT
ATCCCTGCTG ACAAAATCAC TGCTCGCGGT GAAGGTCAAG CAAACCCAGT TACAGGCAAC
ACCTGTGACA ACGTGAAACC ACGTGCTGCT CTGATTGAGT GCCTGGCACC AGATCGTCGC
GTAGAGATCG AAGTGAAAGG CTACAAAGAA GTTGTGACTC AGCCACAGGC TTAA
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| Protein sequence | MRRKMKKTAI ALAVALVGFA TVAQAAPKDN TWYTGGKLGW SQYQDTGSII NNDGPTHKDQ
LGAGAFFGYQ ANQYLGFEMG YDWLGRMPYK GDINNGAFKA QGVQLAAKLS YPVAQDLDVY
TRLGGLVWRA DAKGSFDGGL DRASGHDTGV SPLVALGAEY AWTKNWATRM EYQWVNNIGD
RETVGARPDN GLLSVGVSYR FGQEDAAAPI VAPTPAPAPI VDTKRFTLKS DVLFGFNKAN
LKPEGQQALD QLYAQLSSID PKDGSVVVLG FADRIGQPAP NLALSQRRAD SVRDYLVSKG
IPADKITARG EGQANPVTGN TCDNVKPRAA LIECLAPDRR VEIEVKGYKE VVTQPQA
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