| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2505 |
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| Symbol | |
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| ID | 5385257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2835605 |
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| End bp | 2838247 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640865495 |
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| Product | AAA family ATPase |
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| Protein accession | YP_001401473 |
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| Protein GI | 153948469 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACATC AGTCAGCCAT ATTACTTCGC CGCTTAAATC CCTATTGCGC ACAGGCACTG
GCCGGTGCTG CCACCCTGTG TCAGACCCGC GCCCATGCCG AGATCACTGT CGAACACTGG
TTGTTAAAAC TGCTGGAGCA GGGCGAAGGC GATATCACGG TGATTGCCCG GCGTTATGAG
TGGGACATGG ACAGCCTGTG GCAGGGATTA CTGGCCCATC TGGACACCTT GCCGCGCACG
GTACAGGGCA AACCTCAGTT GTCCGCCGCG TTACAGCAAC TGATCAAAAA CGCCTGGCTG
GATGCCTCGT TGCAGGAAAA TGCCGAGGCG GTGCGCTCGG TTCATCTGCT GGCGGCGCTG
ATTGCCACGC CATCATTATT GGCCGCCGAT GCTGCCTGGC CGTTGCTCAG CCTGAGCACC
ACTCAGCTAC AGCGCCTGTT GCCGTTGCTG GACAGCCAAT CCGACGAACG TCCTGAGGTG
CAGCAGGCTG CGGCACTGGC CGACAGCCCG GTCAATCTGG CCGATGAGGC CGCGACGGTT
ACCTCCGCCA GTGGTCAGCC GCAACTGAAT GACGCGCTGC AAGCGGCGCT GGATAAATTT
ACCCTCGATG TCACCGCCAA AGCCCGTGCC AACCAGATTG ATCCGATTTT TGGCCGCGAC
AGCGAGATCC GCCAGATGAT TGATATCCTG TCGCGCCGCC GTAAAAACAA CCCGATTTTG
GTGGGTGAAC CGGGTGTGGG GAAAACCGCC TTGGTTGAAG GGCTGGCACT GCGCATTGCC
GAGGGCAACG TACCGGACAG CCTGAAAACC GTCAGTGTGC GCACACTGGA TTTGGGTCTG
TTACAGGCCG GTGCCGGGGT CAAAGGCGAG TTCGAACAGC GCCTGAAAAA TGTTATCGAG
GCGGTGCAAC AATCCCCCAG CCCGGTGCTG CTGTTTATCG ACGAAGCCCA CACCATTATC
GGGGCCGGTA ATCAGGCCGG TGGTGCCGAT GCGGCCAACC TGCTGAAACC GGCACTGGCG
CGTGGCGAAC TGCGCACCAT CGCCGCCACC ACCTGGTCCG AATACAAACA GTATTTTGAA
CGCGATGCCG CACTGGAGCG CCGCTTCCAG ATGGTCAAAG TGGACGAGCC GGATGATGAC
ACCGCCTGCC TGATGCTGCG TGGCCTGAAA GAACGTTACG CCACCCATCA CGGCGTGCAT
ATTCTGGACG CCGCTATCAC CGCAGCGGTT ACCCTGTCGC GCCGCTTCCT GACCGGCCGC
CAACTGCCGG ACAAAGCGGT GGATCTGCTC GATACCGCCG GTGCCCGGGT GCGCATGAGC
ATTGACACCT TGCCGACTGC GCTGATGGCG ATTAACGCCG AGCTGGCCGC ACTGGCGATG
GAGCAACAGG CCATCGAACA GGACTTGCTC CTGCTGCCGA ATGTCAGTTC AACGCGCTTA
CCTGAGATTG AGCAACGCCG CGCCGCGCTG GCGGTTGGGC AGCACACACT CGAACAGCAA
TATAAAGAAG AGAAACGGCT GACCACCCTG ATTATCGAGG CGCGTCAGGA CATCGCCAAC
GCGGCACATC TGGTCGCGTT GCAGGAGGAA CTCGTTCAGA TCCAAGGCAA TGCGCCGCTG
CTGTCGCTGG ACGTTGATGT GCGCACTGTT GCGGCTGTGA TCGCCGACTG GACCGGCGTG
CCGCTGGGCA GTTTACTCAA AGACGAACAA ACCAACTTGC TGTCACTGGA AAATCGTCTG
GGTGAGCGAG TGATTGGGCA GGATGCGGCA TTAGGTGCGC TGGCGCAGCG GCTGCGGGCC
GCCAAAACCG GCCTGACATC AGAGAATGGC CCGCTGGGGG TGTTCCTGCT GGTCGGGCCG
AGTGGGATCG GCAAAACCGA AACCGCGTTG GCACTGGCCG ACAGCCTGTT CGGCGGCGAG
AAATCGCTGA TCACCATCAA CATGTCCGAA TATCAGGAAG CACACACCGT CTCCCAATTG
AAAGGGTCGC CCCCGGGCTA TGTCGGCTAC GGTCAGGGCG GCGTATTGAC CGAAGCGGTG
CGCAAACGGC CTTACAGCGT GGTGCTGCTG GATGAAGTCG AGAAGGCCCA TCGTGATGTG
TTGAACCTGT TCTATCAGGT GTTTGACCGC GGTTTTATGC GCGACGGTGA AGGGCGCGAA
ATTGATTTCC GCAACACGGT GATGGTGATG ACCGCCAATC TGGGCAGTGA TCATCTGATG
CAGTTGCTGG ATGAGCAACC GGACGCGCCG GACAGCACCC TGCATGAACT GCTGCGGCCG
ATCCTACGCG ACCACTTCCA GCCCGCGCTG CTGGCCCGCT TCCAGACCTT GATTTACCGC
CCGCTTCAGG TGGATGCGCT CAAACGCATT GTGGCGATAA AACTGAATCA GGTGGCGCAA
CGCCTGCACT GTCACTACGG CCTGAGCTGC CAGATTGAAG ACAGCCTGAC CGACACACTG
GTCGCCGCCT GCCTGCTGCC GGACACCGGC GCACGCAACA TCGACAGCCT GCTCAATCAG
CAGATTTTAC CGGTATTGAG CCAGCAGCTG TTAAGCCGCA TGAGCGAGCA ACAGCGCACC
ACCTCGCTGA CGCTGGGCTG GCATGAAGAA GATGGCATCA CGCTGACATT TGAGGGCGAA
TAA
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| Protein sequence | MEHQSAILLR RLNPYCAQAL AGAATLCQTR AHAEITVEHW LLKLLEQGEG DITVIARRYE
WDMDSLWQGL LAHLDTLPRT VQGKPQLSAA LQQLIKNAWL DASLQENAEA VRSVHLLAAL
IATPSLLAAD AAWPLLSLST TQLQRLLPLL DSQSDERPEV QQAAALADSP VNLADEAATV
TSASGQPQLN DALQAALDKF TLDVTAKARA NQIDPIFGRD SEIRQMIDIL SRRRKNNPIL
VGEPGVGKTA LVEGLALRIA EGNVPDSLKT VSVRTLDLGL LQAGAGVKGE FEQRLKNVIE
AVQQSPSPVL LFIDEAHTII GAGNQAGGAD AANLLKPALA RGELRTIAAT TWSEYKQYFE
RDAALERRFQ MVKVDEPDDD TACLMLRGLK ERYATHHGVH ILDAAITAAV TLSRRFLTGR
QLPDKAVDLL DTAGARVRMS IDTLPTALMA INAELAALAM EQQAIEQDLL LLPNVSSTRL
PEIEQRRAAL AVGQHTLEQQ YKEEKRLTTL IIEARQDIAN AAHLVALQEE LVQIQGNAPL
LSLDVDVRTV AAVIADWTGV PLGSLLKDEQ TNLLSLENRL GERVIGQDAA LGALAQRLRA
AKTGLTSENG PLGVFLLVGP SGIGKTETAL ALADSLFGGE KSLITINMSE YQEAHTVSQL
KGSPPGYVGY GQGGVLTEAV RKRPYSVVLL DEVEKAHRDV LNLFYQVFDR GFMRDGEGRE
IDFRNTVMVM TANLGSDHLM QLLDEQPDAP DSTLHELLRP ILRDHFQPAL LARFQTLIYR
PLQVDALKRI VAIKLNQVAQ RLHCHYGLSC QIEDSLTDTL VAACLLPDTG ARNIDSLLNQ
QILPVLSQQL LSRMSEQQRT TSLTLGWHEE DGITLTFEGE
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