Gene YpsIP31758_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2460 
Symbol 
ID5385547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2778489 
End bp2778896 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content47% 
IMG OID640865451 
Producthypothetical protein 
Protein accessionYP_001401429 
Protein GI153947817 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAATA TGATGTCACT TTGCTGGCAG TACCTGCGAG CTTTCACCAT TATTTACCTG 
TGCTTATGGG CAGGGAAAGC TCTGGCCTTA CTTCTGCCGA TTGTCATCCC CGGCAGTATC
ATCGGCATGT TGATTCTGTT CGTCTTACTC ACCTTGCAGA TTTTACCCTC ACCTTGGGTA
AAACCAAGCT GCCAGTTACT GATCCGCTAT ATGGCGCTAC TGTTTGTGCC GATAGGCGTC
GGAGTCATGC AATATTACGA ACAGCTCACT AAACAGTTCG GTCCGATCGT GGTTTCCTGC
TTTATCAGTA CCTTAATTGT TATGTTAGTG GTGGCCTATA GCTCACATTA TGTCCACCGT
GACCGCAAAG TCATTAGCCC TTCAACACCG ACTGAGGGGG AAAAATGA
 
Protein sequence
MRNMMSLCWQ YLRAFTIIYL CLWAGKALAL LLPIVIPGSI IGMLILFVLL TLQILPSPWV 
KPSCQLLIRY MALLFVPIGV GVMQYYEQLT KQFGPIVVSC FISTLIVMLV VAYSSHYVHR
DRKVISPSTP TEGEK