Gene YpsIP31758_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2429 
SymbolhisD 
ID5388268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2737901 
End bp2739232 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content53% 
IMG OID640865420 
Producthistidinol dehydrogenase 
Protein accessionYP_001401398 
Protein GI153947701 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCGA CGAATTTCAA TACCCTGATC AATTGGCAAC AATGCAGTGA AGAACAGCAA 
AAAGCGCTGT TGAGCCGCCC GGCCATCAAT GCATCCGAGA GGATCACTGC GGCGGTCAGT
GACATCCTGG ACCGGGTGAA AGCGGAAGGC GATAGCGCCC TGCGTGATTT TAGCCAGCGT
TTTGACCATG TGCAGGTCGC GGATATCCGT ATCACTGCAT CAGAGATCGC TGCGGCCTCG
GCGCGCCTGA GTGACGATGT CAAGCACGCC ATGGCACAGG CGGTACGTAA TATTGAAATC
TTCCACAATG CGCAGAAAAT GCCGGTGGTG GATGTTGAAA CTCAGCCGGG TGTGCGTTGT
CAGCAAATCA CGCGTCCGAT TGCTTCCGTC GGCTTGTATA TTCCCGGTGG TTCTGCACCG
TTGCCATCAA CCGTACTGAT GCTCGGCACC CCAGCACGTA TTGCCGGTTG TCAGCGGGTC
GTTTTATGTT CTCCACCGCC TATTGCCGAT GAAATTTTGT ATGCCGCTCA ACTGTGCGGT
ATTCAGGAAG TGTTCCAGAT CGGCGGGGCA CAAGCGATCG CCGCCATGGC ATTCGGCAGT
GAATCAGTAC CTAAAGTGCA CAAAATTTTT GGGCCGGGCA ACGCTTATGT CACTGAAGCA
AAACGTCAGG TTAGCCAGCG CCTGGACGGT GCTGCCATCG ATATGCCCGC AGGCCCATCA
GAGGTGTTGG TGATCGCCGA CAGCGGTGCT ACACCTGCGT TTATCGCGGC GGATTTACTC
TCACAAGCAG AACACGGGCC TGATTCTCAA GTGATCTTAC TGACACCTGA TGCCGCTATC
GCACAAGCGG TGGCAGTCGA AGTTGAGCAA CAACTCGCGC TGTTATCCCG AGCCGATATT
GCCCGTCAGG CACTGGAAAG CAGCCGTTTG ATCGTGACCA ACGATTTACA GCAATGCATT
GATATCAGTA ATGCATACGG CCCTGAGCAT TTGATTCTAC AAATTCGTCA ACCAGAAGAA
ATCATTGACC AGATTGATAA CGCTGGCTCC GTGTTTATGG GCGATTGGTC ACCGGAATCA
GCTGGGGATT ACGCCTCGGG CACCAACCAC GTACTGCCAA CCTACGGTTA TACCTCAACC
TATTCCAGTT TAGGTTTGGC TGATTTTGTT AAGCGCATGA CCGTACAGCA ATTGACACCA
CAGGGTTTGT TAGGGCTGGC CTCCACCATC GAAACACTGG CACAGGCCGA ACAACTGACC
GCACACAAAA ATGCAGTTAC CCTGCGCGTT ACCGCCTTGA ATAACGCCCT GACCGCCGTG
AATAAGGAGT AA
 
Protein sequence
MQPTNFNTLI NWQQCSEEQQ KALLSRPAIN ASERITAAVS DILDRVKAEG DSALRDFSQR 
FDHVQVADIR ITASEIAAAS ARLSDDVKHA MAQAVRNIEI FHNAQKMPVV DVETQPGVRC
QQITRPIASV GLYIPGGSAP LPSTVLMLGT PARIAGCQRV VLCSPPPIAD EILYAAQLCG
IQEVFQIGGA QAIAAMAFGS ESVPKVHKIF GPGNAYVTEA KRQVSQRLDG AAIDMPAGPS
EVLVIADSGA TPAFIAADLL SQAEHGPDSQ VILLTPDAAI AQAVAVEVEQ QLALLSRADI
ARQALESSRL IVTNDLQQCI DISNAYGPEH LILQIRQPEE IIDQIDNAGS VFMGDWSPES
AGDYASGTNH VLPTYGYTST YSSLGLADFV KRMTVQQLTP QGLLGLASTI ETLAQAEQLT
AHKNAVTLRV TALNNALTAV NKE