Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2429 |
Symbol | hisD |
ID | 5388268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2737901 |
End bp | 2739232 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640865420 |
Product | histidinol dehydrogenase |
Protein accession | YP_001401398 |
Protein GI | 153947701 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0141] Histidinol dehydrogenase |
TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCCGA CGAATTTCAA TACCCTGATC AATTGGCAAC AATGCAGTGA AGAACAGCAA AAAGCGCTGT TGAGCCGCCC GGCCATCAAT GCATCCGAGA GGATCACTGC GGCGGTCAGT GACATCCTGG ACCGGGTGAA AGCGGAAGGC GATAGCGCCC TGCGTGATTT TAGCCAGCGT TTTGACCATG TGCAGGTCGC GGATATCCGT ATCACTGCAT CAGAGATCGC TGCGGCCTCG GCGCGCCTGA GTGACGATGT CAAGCACGCC ATGGCACAGG CGGTACGTAA TATTGAAATC TTCCACAATG CGCAGAAAAT GCCGGTGGTG GATGTTGAAA CTCAGCCGGG TGTGCGTTGT CAGCAAATCA CGCGTCCGAT TGCTTCCGTC GGCTTGTATA TTCCCGGTGG TTCTGCACCG TTGCCATCAA CCGTACTGAT GCTCGGCACC CCAGCACGTA TTGCCGGTTG TCAGCGGGTC GTTTTATGTT CTCCACCGCC TATTGCCGAT GAAATTTTGT ATGCCGCTCA ACTGTGCGGT ATTCAGGAAG TGTTCCAGAT CGGCGGGGCA CAAGCGATCG CCGCCATGGC ATTCGGCAGT GAATCAGTAC CTAAAGTGCA CAAAATTTTT GGGCCGGGCA ACGCTTATGT CACTGAAGCA AAACGTCAGG TTAGCCAGCG CCTGGACGGT GCTGCCATCG ATATGCCCGC AGGCCCATCA GAGGTGTTGG TGATCGCCGA CAGCGGTGCT ACACCTGCGT TTATCGCGGC GGATTTACTC TCACAAGCAG AACACGGGCC TGATTCTCAA GTGATCTTAC TGACACCTGA TGCCGCTATC GCACAAGCGG TGGCAGTCGA AGTTGAGCAA CAACTCGCGC TGTTATCCCG AGCCGATATT GCCCGTCAGG CACTGGAAAG CAGCCGTTTG ATCGTGACCA ACGATTTACA GCAATGCATT GATATCAGTA ATGCATACGG CCCTGAGCAT TTGATTCTAC AAATTCGTCA ACCAGAAGAA ATCATTGACC AGATTGATAA CGCTGGCTCC GTGTTTATGG GCGATTGGTC ACCGGAATCA GCTGGGGATT ACGCCTCGGG CACCAACCAC GTACTGCCAA CCTACGGTTA TACCTCAACC TATTCCAGTT TAGGTTTGGC TGATTTTGTT AAGCGCATGA CCGTACAGCA ATTGACACCA CAGGGTTTGT TAGGGCTGGC CTCCACCATC GAAACACTGG CACAGGCCGA ACAACTGACC GCACACAAAA ATGCAGTTAC CCTGCGCGTT ACCGCCTTGA ATAACGCCCT GACCGCCGTG AATAAGGAGT AA
|
Protein sequence | MQPTNFNTLI NWQQCSEEQQ KALLSRPAIN ASERITAAVS DILDRVKAEG DSALRDFSQR FDHVQVADIR ITASEIAAAS ARLSDDVKHA MAQAVRNIEI FHNAQKMPVV DVETQPGVRC QQITRPIASV GLYIPGGSAP LPSTVLMLGT PARIAGCQRV VLCSPPPIAD EILYAAQLCG IQEVFQIGGA QAIAAMAFGS ESVPKVHKIF GPGNAYVTEA KRQVSQRLDG AAIDMPAGPS EVLVIADSGA TPAFIAADLL SQAEHGPDSQ VILLTPDAAI AQAVAVEVEQ QLALLSRADI ARQALESSRL IVTNDLQQCI DISNAYGPEH LILQIRQPEE IIDQIDNAGS VFMGDWSPES AGDYASGTNH VLPTYGYTST YSSLGLADFV KRMTVQQLTP QGLLGLASTI ETLAQAEQLT AHKNAVTLRV TALNNALTAV NKE
|
| |