Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2421 |
Symbol | |
ID | 5388265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2728834 |
End bp | 2730225 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640865412 |
Product | amino acid permease family protein |
Protein accession | YP_001401390 |
Protein GI | 153950631 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCATG ATGCAACTGT TGCCGTCGGC ACGAATCAAA CGGGTACCAA TAACCGCGTC CAACTCAGAA AAACCCTGAC GTTGGTTCAA GTGGTAATGA TGGGTCTGGC TTATCTACAG CCTATGACCA TTTTTGATAC TTTCGGTATT GTATCCGGCC TGACCGATGG TCATGTCGCG ACCTCTTACG CCATTGCGTT GATTGCGGTG CTGTTCACGG CCGTCAGCTA TGGCAAATTG GTTAAGCGCT TCCCGTCTGC GGGCTCCGCT TATACCTACG CCCAGAAATC CATCAGCCCG AATGTTGGCT TTATGGTGGG TTGGTCATCA TTGCTGGACT ACCTGTTCAT GCCGATGATC AACATTCTGT TGGCAAAAAT TTATCTTGAG GCGATTTTCC CTGGTGTGCC GTCGTGGATT TTTGTCGGTG CGCTGGTCAG CCTAATGACG CTGTTCAACC TGCGTGGCAT CAATATCGTC GCGAACCTGA ACTCGGTCAT TGTGGTGGTA CAGGTGGCGA TCATGGTGGT CTTTATGGGG CTGCTGATCC ATGGCGTTTA TCAAGGCGAA GGGGCTGGTA CGTTAGTCAG TGCGCGGCCG TTCTATTCTG AAAATGCGCA TTTGGTGCCA ATGATAACCG GGGCCACGAT ACTCTGCTTC TCGTTCCTTG GTTTCGATGG GATCAGCTCC TTGTCGGAAG AGACCCCGAA TGCCGGTAAA GTGATCCCGA AAGCGATTTT CCTGACAGCG TTGATTGGTG GCATCATCTT TATCGCGGTG TCTTACTGCT TGCAGCTCTA TTTCCCGAAT ATTTCGCGCT TCACCGATCC TGAAGCGTCA CAGCCGGAAA TCATGCTGTT TGTGGCGGGT AAATTCTTCC AGTCAGTGAT CCTGTGTTTC TCCTGTGTCA CCGTATTGGC ATCAGGTATG GCCGCACACG CAGGGGTTTC ACGTCTGCTG TATGTGATGG GCCGTGATGG TGTATTCCCA GAGAAAGTGT TCGGTTATGT GCACCCTAAA TGGCGTACTC CGGCGATTAA CGTTCTGTTA GTGGGTGGCG TGGCATTGTC CGCTATCTCA TTTGATCTGG TAACGGCAAC GGCATTGATT AACTTTGGTG CGCTGGTGGC GTTCACCTTC GTTAACTTGT CTGTGATTGC TCAGTTCTAT GTTCGTGAAC GCCGCAACAG TACGTTCAAG GATCACTTCA ACTACCTGAT TCTGCCAATG ATTGGTGCGG GTACGGTGGG GGTACTGTGG GTGAATCTGG AAAGTAGTTC AATGACGTTG GGCCTGGTCT GGGGCGCAAT TGGGTTGAGC TATATGGTCT GGAAAACGCG CGCTTTCCGT CGGGCGCTGC CGCAGTTTAC TGAAGAACCT GCCCAGTTAT AA
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Protein sequence | MAHDATVAVG TNQTGTNNRV QLRKTLTLVQ VVMMGLAYLQ PMTIFDTFGI VSGLTDGHVA TSYAIALIAV LFTAVSYGKL VKRFPSAGSA YTYAQKSISP NVGFMVGWSS LLDYLFMPMI NILLAKIYLE AIFPGVPSWI FVGALVSLMT LFNLRGINIV ANLNSVIVVV QVAIMVVFMG LLIHGVYQGE GAGTLVSARP FYSENAHLVP MITGATILCF SFLGFDGISS LSEETPNAGK VIPKAIFLTA LIGGIIFIAV SYCLQLYFPN ISRFTDPEAS QPEIMLFVAG KFFQSVILCF SCVTVLASGM AAHAGVSRLL YVMGRDGVFP EKVFGYVHPK WRTPAINVLL VGGVALSAIS FDLVTATALI NFGALVAFTF VNLSVIAQFY VRERRNSTFK DHFNYLILPM IGAGTVGVLW VNLESSSMTL GLVWGAIGLS YMVWKTRAFR RALPQFTEEP AQL
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