Gene YpsIP31758_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2421 
Symbol 
ID5388265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2728834 
End bp2730225 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content51% 
IMG OID640865412 
Productamino acid permease family protein 
Protein accessionYP_001401390 
Protein GI153950631 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCATG ATGCAACTGT TGCCGTCGGC ACGAATCAAA CGGGTACCAA TAACCGCGTC 
CAACTCAGAA AAACCCTGAC GTTGGTTCAA GTGGTAATGA TGGGTCTGGC TTATCTACAG
CCTATGACCA TTTTTGATAC TTTCGGTATT GTATCCGGCC TGACCGATGG TCATGTCGCG
ACCTCTTACG CCATTGCGTT GATTGCGGTG CTGTTCACGG CCGTCAGCTA TGGCAAATTG
GTTAAGCGCT TCCCGTCTGC GGGCTCCGCT TATACCTACG CCCAGAAATC CATCAGCCCG
AATGTTGGCT TTATGGTGGG TTGGTCATCA TTGCTGGACT ACCTGTTCAT GCCGATGATC
AACATTCTGT TGGCAAAAAT TTATCTTGAG GCGATTTTCC CTGGTGTGCC GTCGTGGATT
TTTGTCGGTG CGCTGGTCAG CCTAATGACG CTGTTCAACC TGCGTGGCAT CAATATCGTC
GCGAACCTGA ACTCGGTCAT TGTGGTGGTA CAGGTGGCGA TCATGGTGGT CTTTATGGGG
CTGCTGATCC ATGGCGTTTA TCAAGGCGAA GGGGCTGGTA CGTTAGTCAG TGCGCGGCCG
TTCTATTCTG AAAATGCGCA TTTGGTGCCA ATGATAACCG GGGCCACGAT ACTCTGCTTC
TCGTTCCTTG GTTTCGATGG GATCAGCTCC TTGTCGGAAG AGACCCCGAA TGCCGGTAAA
GTGATCCCGA AAGCGATTTT CCTGACAGCG TTGATTGGTG GCATCATCTT TATCGCGGTG
TCTTACTGCT TGCAGCTCTA TTTCCCGAAT ATTTCGCGCT TCACCGATCC TGAAGCGTCA
CAGCCGGAAA TCATGCTGTT TGTGGCGGGT AAATTCTTCC AGTCAGTGAT CCTGTGTTTC
TCCTGTGTCA CCGTATTGGC ATCAGGTATG GCCGCACACG CAGGGGTTTC ACGTCTGCTG
TATGTGATGG GCCGTGATGG TGTATTCCCA GAGAAAGTGT TCGGTTATGT GCACCCTAAA
TGGCGTACTC CGGCGATTAA CGTTCTGTTA GTGGGTGGCG TGGCATTGTC CGCTATCTCA
TTTGATCTGG TAACGGCAAC GGCATTGATT AACTTTGGTG CGCTGGTGGC GTTCACCTTC
GTTAACTTGT CTGTGATTGC TCAGTTCTAT GTTCGTGAAC GCCGCAACAG TACGTTCAAG
GATCACTTCA ACTACCTGAT TCTGCCAATG ATTGGTGCGG GTACGGTGGG GGTACTGTGG
GTGAATCTGG AAAGTAGTTC AATGACGTTG GGCCTGGTCT GGGGCGCAAT TGGGTTGAGC
TATATGGTCT GGAAAACGCG CGCTTTCCGT CGGGCGCTGC CGCAGTTTAC TGAAGAACCT
GCCCAGTTAT AA
 
Protein sequence
MAHDATVAVG TNQTGTNNRV QLRKTLTLVQ VVMMGLAYLQ PMTIFDTFGI VSGLTDGHVA 
TSYAIALIAV LFTAVSYGKL VKRFPSAGSA YTYAQKSISP NVGFMVGWSS LLDYLFMPMI
NILLAKIYLE AIFPGVPSWI FVGALVSLMT LFNLRGINIV ANLNSVIVVV QVAIMVVFMG
LLIHGVYQGE GAGTLVSARP FYSENAHLVP MITGATILCF SFLGFDGISS LSEETPNAGK
VIPKAIFLTA LIGGIIFIAV SYCLQLYFPN ISRFTDPEAS QPEIMLFVAG KFFQSVILCF
SCVTVLASGM AAHAGVSRLL YVMGRDGVFP EKVFGYVHPK WRTPAINVLL VGGVALSAIS
FDLVTATALI NFGALVAFTF VNLSVIAQFY VRERRNSTFK DHFNYLILPM IGAGTVGVLW
VNLESSSMTL GLVWGAIGLS YMVWKTRAFR RALPQFTEEP AQL