Gene YpsIP31758_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2402 
Symbol 
ID5385577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2703183 
End bp2703812 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID640865392 
ProductLuxR family DNA-binding response regulator 
Protein accessionYP_001401371 
Protein GI153949615 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000137953 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATG TTGCATTGAT TGACGACCAT ATTGTCGTCC GTTCTGGTTT TGCTCAATTA 
CTGTCACTGG AAGAAGATAT ACGCATTATT GGCGAATACG GTTGTGCGGC CGAGGCATGG
GAAAATCTGC CCAAAACGGA TGTACATGTG GCGGTAATAG ATATTTCAAT GCCGGATGAG
AGTGGGCTAA GCCTGCTCAA GCGCCTGCGC CAACAGATAC CGCATTTTCG CGCCATTATT
CTGAGTATTT ATGACACAAC CGCCTTTGTG CAGAGTGCAA TGGACGCCGG AGCCAGTGGC
TACCTGACCA AACGCTGTGA TCCAGCGGCA TTGGTACAGG CACTGCGCAC CGTCAATGGC
GGCGGCCTTT ATCTATGTAC CGATGCGCTA CGGGCGCTAC GCCAAATGCC TCAACAGCCG
AGTAAGCTGA CAATTTTAAC TCCGCGAGAA AAAGAGATTT TTCAATTATT GGTCAAAGGG
ATAAGTGTAA AAGCCCTTGC CGAACAGTTG TCGCTCAGCC ATAAAACCGT TCATGTCCAT
CGGGCCAATA TTCTGAGTAA ACTCAATTGT GAAACCACCA TTGAACTGGT GCACTTCGCA
CTACAGCATC AGCTACTGGC GGGTAACTGA
 
Protein sequence
MINVALIDDH IVVRSGFAQL LSLEEDIRII GEYGCAAEAW ENLPKTDVHV AVIDISMPDE 
SGLSLLKRLR QQIPHFRAII LSIYDTTAFV QSAMDAGASG YLTKRCDPAA LVQALRTVNG
GGLYLCTDAL RALRQMPQQP SKLTILTPRE KEIFQLLVKG ISVKALAEQL SLSHKTVHVH
RANILSKLNC ETTIELVHFA LQHQLLAGN