Gene YpsIP31758_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2393 
Symbol 
ID5388464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp2693473 
End bp2694489 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content49% 
IMG OID640865383 
ProductLacI family sugar-binding transcriptional regulator 
Protein accessionYP_001401362 
Protein GI153948594 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value7.93999e-16 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTGA AGAAAATTGC AAATGAGCTT GGGCTGTCCT CCACAACGGT AAGCCGCGCG 
TTAAATGGCT ATGATGATGT TGCGGCCGAA ACACGTGAGC GGATTATCGA TGCGGCCAAG 
AGATTGGGTT ATCAACCGAA TTCCTTAGCT CGGCGGCTTA AAATGGGGAG AACCGATGCC 
ATTGCTTTGG CGTATCCATC ACGTCCACGA GTGTTGAATA ATTCGACATT TTTGGAAATG 
ATAAGTTGGA TAGGTATCGA ACTCGGAAAA CGGGGTCTCG ATCTGTTGCT CATTCCTGAT 
GAACCTGGTG AGAAATACCA GTCACTTATC CACTTGGTGG AAACGCGTAG AGTGGATGCA 
TTGATCGTGG CTCATACCCA GCCTGAAGAC TTTCGGTTGC AGTATTTGCA GAAACAAAAC 
TTTCCTTTTT TGGCATTGGG GCGTAGCCAT TTACCCAAGC CATATGCATG GTTTGATTTT 
GATAATCACG CTGGCGCTTC GTTGGCAGTG AAGCGGCTTC TCGAACTTGG GCACCAGAGA 
ATTGCATTTG TGAGTACCGA TGCAAGGATT TCATATGTCG ATCAGCGTTT GCAGGGATAT 
GTGCAGACGA TGTCCGAAGC GGGCCTGATG CCGTTGGCAG GGTATCTACA AAAAGCGGAT 
CCCACTCGTC CTGGCGGTTA TCTTGCTGCT TCGCGTTTAT TGGCGCTTGA GGTTCCTCCT 
ACTGCCATTA TCACCGACTG TAATATGCTG GGTGATGGCG TGGCGAGTGC GCTTGATAAA 
GCGGGCTTGT TGGGCGGCGA GGGGATATCG CTTATCGCTT ATGATGGGCT ACCGGATGAT 
AGTTTGTTAG ATATTGCCGT GACCCCTATT GTTCAAAATA CGCGTACCAG TGTAGGTAAA 
CAAATTGCAT CAATGATTTG TGATTTACTG GGGGGGAAGG ATCCTAAAGA ACTACAGGTC 
CTCTGGCAGC CAGAAATAGG AGAGGGTGAA ACCGACGGGG TGAATCGACG TGGATAA
 
Protein sequence
MSLKKIANEL GLSSTTVSRA LNGYDDVAAE TRERIIDAAK RLGYQPNSLA RRLKMGRTDA 
IALAYPSRPR VLNNSTFLEM ISWIGIELGK RGLDLLLIPD EPGEKYQSLI HLVETRRVDA 
LIVAHTQPED FRLQYLQKQN FPFLALGRSH LPKPYAWFDF DNHAGASLAV KRLLELGHQR 
IAFVSTDARI SYVDQRLQGY VQTMSEAGLM PLAGYLQKAD PTRPGGYLAA SRLLALEVPP 
TAIITDCNML GDGVASALDK AGLLGGEGIS LIAYDGLPDD SLLDIAVTPI VQNTRTSVGK 
QIASMICDLL GGKDPKELQV LWQPEIGEGE TDGVNRRG