Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2392 |
Symbol | |
ID | 5386290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2692250 |
End bp | 2693062 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865381 |
Product | hypothetical protein |
Protein accession | YP_001401361 |
Protein GI | 153949134 |
COG category | [S] Function unknown |
COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000000626056 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAAAT GGCTGTGGAA AGCAAATAAA CCGCAAGCGG AGATGCTTGC GCAATGGCAT GAGGCACTGA ATATTCCTTT GCTGGCTCCA TTAAACGAAC CAGAACAGCA ACGGTTGGTT TCGGTGGCCA GTCAATTATT ACAACAAAAG CGCTTCATCC CCCTACAAGG CTTGATATTA ACCCCATTGA TGCAAGCACG CCTCGCTTTG CTATTCGCAC TGCCGGTTAT GGAGCTAGGT GCCAAATGGT TAGATGGCTT TCACGAAGTC CTTATTTACC CTTCTCCCTT TATTGTCGCG GAGGACTGGC AAGATGACCT TGGGTTGGTT CATTCAGGCC AAAGCGTACA GTCTGGCCAG AGCTGGGAAC AAGGACCTAT CGTCCTGAAC TGGCAAGATA TTCAAGATTC ATTCGATTTA TCTGGCTTTA ATCTGGTGAT CCATGAAGCT GCCCATAAAT TGGATATGCG TAATGGGGGT CATTCAAATG GCGTGCCCCC CATTGCGATG CGTGATGTGG CGGTATGGGA GCATGATCTA CACCACGCCA TGGATAATAT CCAAGACGAG ATTGATATGG TGGGTGTGGA AGGTGCCAGT ATGGATGCCT ATGCAGCCAG CAATCCAGCA GAATGTTTTG CCGTATTATC AGAATACTTT TTCAGTGCCC CAGAGCTGCT GGAGGGCCGT TTCCCGGCAG TCTATCAACA TTTTTGCCGG TTCTACCGTC AAGATCCATT AGCTCGACTA AAACGCTGGG AAAACTCGCT GGCAGACAAT CCGCCTCCCG AGAATACTCA CTCGCACCGT TAG
|
Protein sequence | MIKWLWKANK PQAEMLAQWH EALNIPLLAP LNEPEQQRLV SVASQLLQQK RFIPLQGLIL TPLMQARLAL LFALPVMELG AKWLDGFHEV LIYPSPFIVA EDWQDDLGLV HSGQSVQSGQ SWEQGPIVLN WQDIQDSFDL SGFNLVIHEA AHKLDMRNGG HSNGVPPIAM RDVAVWEHDL HHAMDNIQDE IDMVGVEGAS MDAYAASNPA ECFAVLSEYF FSAPELLEGR FPAVYQHFCR FYRQDPLARL KRWENSLADN PPPENTHSHR
|
| |