Gene YpsIP31758_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2372 
Symbol 
ID5387055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2672321 
End bp2672890 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content48% 
IMG OID640865361 
Producthypothetical protein 
Protein accessionYP_001401341 
Protein GI153948933 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000118461 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAT CTGCAACAAT TATTCTCGCT TTTGCTATGT CTATGGATGC ATTTGCTGCG 
TCAATTGGCA AAGGTGCCAC ACTGTATAAA CCCCGTTTTC GTGAAGCACT GCGTACTGGC
CTCATTTTTG GCGTCATCGA AGCAATTACC CCGCTGATTG GTTGGTGTAT CGGCCTGTTC
GCCAGCCAAT ATATTATGGA ATGGGATCAC TGGATTGCCT TCAGTCTGCT GTTTATTCTT
GGTTGCCGTA TGATTTTTGA AGGTATGAAA CAGCGGGTAG CAGAAACGGA AAAAATGCGC
AGTCACAGTT TTTGGGTGTT GGTGACAACC GCCATTGCCA CCAGCCTTGA TGCGATGGCG
ATCGGCGTCG GTCTGGCCTT CTTGCAAGTG GATATCGTAC ACACCGCGAT GGCTATTGGC
TTAGCCACCA TGATTATGGC AACGCTGGGG ATGCTGATTG GCCGCTACAT TGGCCCACTA
CTGGGTAAGC GCGCTGAGAT TATCGGCGGG ATCGTATTGA TCGGTATCGG CTTTAATATT
CTGTATGAAC ATATGCACCT TACTGCCTAA
 
Protein sequence
MNLSATIILA FAMSMDAFAA SIGKGATLYK PRFREALRTG LIFGVIEAIT PLIGWCIGLF 
ASQYIMEWDH WIAFSLLFIL GCRMIFEGMK QRVAETEKMR SHSFWVLVTT AIATSLDAMA
IGVGLAFLQV DIVHTAMAIG LATMIMATLG MLIGRYIGPL LGKRAEIIGG IVLIGIGFNI
LYEHMHLTA